RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 POTECB2RU33 542 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 C21orf2O43822 256 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 CYP11B2P19099 503 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 STAT2P52630 851 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 VAV2P52735 878 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 MARSP56192 900 aaKnown RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 HERVK_113P62684 666 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 EDRF1Q3B7T1 1238 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 ZCWPW2Q504Y3 356 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 POTEBQ6S5H4 581 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 CACNA2D4Q7Z3S7 1137 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 OGFOD1Q8N543 542 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 FAM151AQ8WW52 585 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 ATRIPQ8WXE1 791 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 EEF2KMTQ96G04 330 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 PRMT6Q96LA8 375 aaPredicted RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 DEF6Q9H4E7 631 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 ARFGEF1Q9Y6D6 1849 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 FRMD3A2A2Y4 597 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 PNMA6AP0CW24 399 aaPredicted RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 CKAP4Q07065 602 aaKnown RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 LRRC41Q15345 812 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 USH1GQ495M9 461 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 CC2D1AQ6P1N0 951 aaPredicted RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 RSBN1LQ6PCB5 846 aaPredicted RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 SYT2Q8N9I0 419 aaPredicted RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 MSANTD4Q8NCY6 345 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 CHURC1Q8WUH1 139 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 HNRNPLLQ8WVV9 542 aaKnown RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 VPS33BQ9H267 617 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 LUC7LQ9NQ29 371 aaKnown RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 PUF60Q9UHX1 559 aaKnown RBP13.42□□□□□ -0.26
CLN8-212ENST00000637083 FHOD1Q9Y613 1164 aa13.42□□□□□ -0.26
CLN8-212ENST00000637083 ZNF646O15015 1829 aaPredicted RBP13.41□□□□□ -0.26
CLN8-212ENST00000637083 MED24O75448 989 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 MCM3P25205 808 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 KLK7P49862 253 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 SLC12A3P55017 1021 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 DLGAP5Q15398 846 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 PAPD7Q5XG87 772 aaKnown RBP13.41□□□□□ -0.26
CLN8-212ENST00000637083 NCAPH2Q6IBW4 605 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 SYN2Q92777 582 aaPredicted RBP13.41□□□□□ -0.26
CLN8-212ENST00000637083 SECISBP2LQ93073 1101 aaKnown RBP13.41□□□□□ -0.26
CLN8-212ENST00000637083 POLR3CQ9BUI4 534 aaPredicted RBP13.41□□□□□ -0.26
CLN8-212ENST00000637083 PDGFDQ9GZP0 370 aaPredicted RBP13.41□□□□□ -0.26
CLN8-212ENST00000637083 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 TMX2Q9Y320 296 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 SCN9AQ15858 1988 aa13.41□□□□□ -0.26
CLN8-212ENST00000637083 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 CETN3O15182 167 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 LCA5LO95447 670 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
CLN8-212ENST00000637083 AMPD2Q01433 879 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 DMTNQ08495 405 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 FKBP1CQ5VVH2 108 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 IQCEQ6IPM2 695 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 CATSPER3Q86XQ3 398 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 TRIM58Q8NG06 486 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 FAM207AQ9NSI2 230 aaPredicted RBP13.4□□□□□ -0.26
CLN8-212ENST00000637083 CEP72Q9P209 647 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 PCDHA2Q9Y5H9 948 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 SSU72P8A0A1W2PR75 194 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 PLA2G6O60733 806 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 TACC1O75410 805 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 EPS15P42566 896 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 JAG1P78504 1218 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 TRAPPC11Q7Z392 1133 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 FAM160B2Q86V87 743 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 PSMD1Q99460 953 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 RAB21Q9UL25 225 aa13.4□□□□□ -0.26
CLN8-212ENST00000637083 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
CLN8-212ENST00000637083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLN8-212ENST00000637083 CALUO43852 315 aaPredicted RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 AKR1B10O60218 316 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 TBC1D12O60347 775 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 MUTP22033 750 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 GPS2Q13227 327 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 RRAGAQ7L523 313 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 ZC3H3Q8IXZ2 948 aaKnown RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 TTLL6Q8N841 843 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 GJA10Q969M2 543 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 IFIH1Q9BYX4 1025 aaKnown RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 ZSWIM4Q9H7M6 989 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 RABGAP1Q9Y3P9 1069 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 TCP10L2B9ZVM9 353 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 GCOM1H8Y6P7 765 aaPredicted RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 ABL1P00519 1130 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 VIL1P09327 827 aaKnown RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 GAP43P17677 238 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 STAT3P40763 770 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 KIF11P52732 1056 aa13.39□□□□□ -0.27
CLN8-212ENST00000637083 MAPK8IP2Q13387 824 aaPredicted RBP13.39□□□□□ -0.27
CLN8-212ENST00000637083 ADAM9Q13443 819 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms