RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 TEKT2Q9UIF3 430 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 ASAP1Q9ULH1 1129 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 RUFY4Q6ZNE9 571 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 ARHGAP45Q92619 1136 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 TNKSO95271 1327 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 RPN1P04843 607 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 ARL4DP49703 201 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 MECOMQ03112 1051 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 MFSD4BQ5TF39 518 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 MAIP1Q8WWC4 291 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 PUS3Q9BZE2 481 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 RAVER2Q9HCJ3 691 aaKnown RBP19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 TOP2BQ02880 1626 aa19.3■□□□□ 0.68
CACNA1A-227ENST00000636549 OCRLQ01968 901 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 CATSPER4Q7RTX7 472 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 RAET1EQ8TD07 263 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 PPP1R2P41236 205 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 MFAP3P55082 362 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 IMPG1Q17R60 797 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 NUDCD1Q96RS6 583 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 PIGSQ96S52 555 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 SASH1O94885 1247 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 LBHD1Q9BQE6 289 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 KLHL14Q9P2G3 628 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 BHMTQ93088 406 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 NDFIP2Q9NV92 336 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 TLK1Q9UKI8 766 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 GTPBP10A4D1E9 387 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 C2orf54Q08AI8 447 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 MAML1Q92585 1016 aa19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 FAF1Q9UNN5 650 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-227ENST00000636549 ARHGAP6O43182 974 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 AOC3Q16853 763 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 PCGF5Q86SE9 256 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 NACC1Q96RE7 527 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 DNAJC6O75061 913 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 KRT10P13645 584 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 MYO1EQ12965 1108 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 EXOC3L4Q17RC7 722 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 GLE1Q53GS7 698 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 TAS2R42Q7RTR8 314 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 B4GALNT2Q8NHY0 566 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 CACTINQ8WUQ7 758 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 OTUD5Q96G74 571 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 ZMYM3Q14202 1370 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 MCF2LO15068 1137 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 PLS3P13797 630 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 PHKA1P46020 1223 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 FAM133BQ5BKY9 247 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 ABTB1Q969K4 478 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 XPO4Q9C0E2 1151 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 CAPN7Q9Y6W3 813 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 A0A1W2PP64 1363 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 USP17L8P0C7I0 530 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 THEM5Q8N1Q8 247 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 ATXN7L3BQ96GX2 97 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 MIS12Q9H081 205 aa19.28■□□□□ 0.68
CACNA1A-227ENST00000636549 VGLL3A8MV65 326 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 GNA14O95837 355 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 RINLQ6ZS11 566 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 CASS4Q9NQ75 786 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 UHRF1BP1Q6BDS2 1440 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 RSPH10B2B2RC85 870 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 PRPSAP2O60256 369 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 RSPH10BP0C881 870 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 ADCK2Q7Z695 626 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 C1orf131Q8NDD1 294 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 NT5C1BQ96P26 610 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 ZNF75DP51815 510 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 ART3Q13508 389 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 CYTH2Q99418 400 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 CPB1P15086 417 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 PFKFB1P16118 471 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 COPB2P35606 906 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 PTGDRQ13258 359 aa19.27■□□□□ 0.68
CACNA1A-227ENST00000636549 SRGAP2O75044 1071 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 HIF1AQ16665 826 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 TCP11X2Q5H9J9 407 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 ELMSAN1Q6PJG2 1045 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 SCYL3Q8IZE3 742 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 FAM133AQ8N9E0 248 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 TSC1Q92574 1164 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 USP17L3A6NCW0 530 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 USP17L4A6NCW7 530 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 USP17L1Q7RTZ2 530 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 AGR3Q8TD06 166 aa19.27■□□□□ 0.67
CACNA1A-227ENST00000636549 SNX2O60749 519 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 ADORA2BP29275 332 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 GUCY2DQ02846 1103 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 ZKSCAN5Q9Y2L8 839 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 GINM1Q9NU53 330 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 HPCAL4Q9UM19 191 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 UBA6A0AVT1 1052 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 URGCPQ8TCY9 931 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 MSTO1Q9BUK6 570 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 PIGOQ8TEQ8 1089 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 IWS1Q96ST2 819 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms