RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ZNF543Q08ER8 600 aa21.3■■□□□ 1
CLN6-212ENST00000636020 COASYQ13057 564 aa21.3■■□□□ 1
CLN6-212ENST00000636020 APBB2Q92870 758 aa21.3■■□□□ 1
CLN6-212ENST00000636020 RMDN3Q96TC7 470 aa21.3■■□□□ 1
CLN6-212ENST00000636020 MRVI1Q9Y6F6 885 aa21.3■■□□□ 1
CLN6-212ENST00000636020 C17orf102A2RUQ5 167 aa21.29■■□□□ 1
CLN6-212ENST00000636020 PRR23AA6NEV1 266 aa21.29■■□□□ 1
CLN6-212ENST00000636020 ORC4O43929 436 aa21.29■■□□□ 1
CLN6-212ENST00000636020 CAND2O75155 1236 aa21.29■■□□□ 1
CLN6-212ENST00000636020 EIF3JO75822 258 aaKnown RBP21.29■■□□□ 1
CLN6-212ENST00000636020 CSPG5O95196 566 aa21.29■■□□□ 1
CLN6-212ENST00000636020 EFHBQ8N7U6 833 aa21.29■■□□□ 1
CLN6-212ENST00000636020 C16orf70Q9BSU1 422 aa21.29■■□□□ 1
CLN6-212ENST00000636020 PHF7Q9BWX1 381 aaPredicted RBP21.29■■□□□ 1
CLN6-212ENST00000636020 RC3H2Q9HBD1 1191 aaKnown RBP21.29■■□□□ 1
CLN6-212ENST00000636020 ANAPC4Q9UJX5 808 aa21.29■■□□□ 1
CLN6-212ENST00000636020 USP15Q9Y4E8 981 aaPredicted RBP21.29■■□□□ 1
CLN6-212ENST00000636020 ADGRA3Q8IWK6 1321 aa21.29■■□□□ 1
CLN6-212ENST00000636020 TREHO43280 583 aa21.28■■□□□ 1
CLN6-212ENST00000636020 CTSHP09668 335 aa21.28■■□□□ 1
CLN6-212ENST00000636020 FGRP09769 529 aa21.28■■□□□ 1
CLN6-212ENST00000636020 HSDL1Q3SXM5 330 aa21.28■■□□□ 1
CLN6-212ENST00000636020 MYSM1Q5VVJ2 828 aa21.28■■□□□ 1
CLN6-212ENST00000636020 TSHZ3Q63HK5 1081 aa21.28■■□□□ 1
CLN6-212ENST00000636020 PLVAPQ9BX97 442 aa21.28■■□□□ 1
CLN6-212ENST00000636020 PLAGL2Q9UPG8 496 aa21.28■■□□□ 1
CLN6-212ENST00000636020 TRPC6Q9Y210 931 aa21.28■■□□□ 1
CLN6-212ENST00000636020 SNHG28P0DPA3 235 aa21.27■■□□□ 1
CLN6-212ENST00000636020 ICAM3P32942 547 aa21.27■■□□□ 1
CLN6-212ENST00000636020 ADGRD2Q7Z7M1 963 aa21.27■■□□□ 1
CLN6-212ENST00000636020 PPP2R3CQ969Q6 453 aa21.27■■□□□ 1
CLN6-212ENST00000636020 SPATA33Q96N06 139 aa21.27■■□□□ 1
CLN6-212ENST00000636020 TCP11L1Q9NUJ3 509 aa21.27■■□□□ 1
CLN6-212ENST00000636020 GALR2O43603 387 aaPredicted RBP21.26■□□□□ 0.99
CLN6-212ENST00000636020 NR3C2P08235 984 aa21.26■□□□□ 0.99
CLN6-212ENST00000636020 EIF2AK2P19525 551 aaKnown RBP21.26■□□□□ 0.99
CLN6-212ENST00000636020 DNAJB1P25685 340 aa21.26■□□□□ 0.99
CLN6-212ENST00000636020 NBL1P41271 181 aa21.26■□□□□ 0.99
CLN6-212ENST00000636020 ZMYM1Q5SVZ6 1142 aa21.26■□□□□ 0.99
CLN6-212ENST00000636020 CELF3Q5SZQ8 465 aaKnown RBP21.26■□□□□ 0.99
CLN6-212ENST00000636020 ARHGEF16Q5VV41 709 aa21.26■□□□□ 0.99
CLN6-212ENST00000636020 ZNF689Q96CS4 500 aaPredicted RBP21.26■□□□□ 0.99
CLN6-212ENST00000636020 RPGRIP1Q96KN7 1286 aa21.26■□□□□ 0.99
CLN6-212ENST00000636020 RNPEPQ9H4A4 650 aa21.26■□□□□ 0.99
CLN6-212ENST00000636020 WDR87Q6ZQQ6 2873 aa21.26■□□□□ 0.99
CLN6-212ENST00000636020 GVINP1Q7Z2Y8 2422 aa21.25■□□□□ 0.99
CLN6-212ENST00000636020 GLP2RO95838 553 aa21.25■□□□□ 0.99
CLN6-212ENST00000636020 SMIM10L2AP0DMW4 78 aa21.25■□□□□ 0.99
CLN6-212ENST00000636020 SMIM10L2BP0DMW5 78 aa21.25■□□□□ 0.99
CLN6-212ENST00000636020 FAM26DQ5JW98 314 aa21.25■□□□□ 0.99
CLN6-212ENST00000636020 P2RX5Q93086 422 aa21.25■□□□□ 0.99
CLN6-212ENST00000636020 DDX19BQ9UMR2 479 aa21.25■□□□□ 0.99
CLN6-212ENST00000636020 ABCB11O95342 1321 aa21.25■□□□□ 0.99
CLN6-212ENST00000636020 H3BRB1 525 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 SORBS3O60504 671 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 RGS20O76081 388 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 PDGFBP01127 241 aaPredicted RBP21.24■□□□□ 0.99
CLN6-212ENST00000636020 ID4P47928 161 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 BTG3Q14201 252 aaPredicted RBP21.24■□□□□ 0.99
CLN6-212ENST00000636020 PTPN21Q16825 1174 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 MCF2L2Q86YR7 1114 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 SPPL3Q8TCT6 385 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 GPATCH3Q96I76 525 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 RIPOR3Q96MK2 946 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 TUT1Q9H6E5 874 aaKnown RBP21.24■□□□□ 0.99
CLN6-212ENST00000636020 PXMP2Q9NR77 195 aa21.24■□□□□ 0.99
CLN6-212ENST00000636020 BARX2Q9UMQ3 279 aaPredicted RBP21.24■□□□□ 0.99
CLN6-212ENST00000636020 KDM4AO75164 1064 aa21.23■□□□□ 0.99
CLN6-212ENST00000636020 GGPS1O95749 300 aa21.23■□□□□ 0.99
CLN6-212ENST00000636020 ITGB1P05556 798 aa21.23■□□□□ 0.99
CLN6-212ENST00000636020 NRIP1P48552 1158 aa21.23■□□□□ 0.99
CLN6-212ENST00000636020 NAALADL2Q58DX5 795 aa21.23■□□□□ 0.99
CLN6-212ENST00000636020 UBA5Q9GZZ9 404 aa21.23■□□□□ 0.99
CLN6-212ENST00000636020 CPVLQ9H3G5 476 aa21.23■□□□□ 0.99
CLN6-212ENST00000636020 DMXL1Q9Y485 3027 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 ENPP3O14638 875 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 GOLGA8HP0CJ92 632 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 MS4A1P11836 297 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 ATF7P17544 494 aaPredicted RBP21.22■□□□□ 0.99
CLN6-212ENST00000636020 SP2Q02086 613 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 CDC37Q16543 378 aaPredicted RBP21.22■□□□□ 0.99
CLN6-212ENST00000636020 GPATCH4Q5T3I0 446 aaKnown RBP21.22■□□□□ 0.99
CLN6-212ENST00000636020 KCNV1Q6PIU1 500 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 SUSD6Q92537 303 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 TTC14Q96N46 770 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 TOMM22Q9NS69 142 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 TTC3P53804 2025 aa21.22■□□□□ 0.99
CLN6-212ENST00000636020 DGKIO75912 1065 aa21.21■□□□□ 0.99
CLN6-212ENST00000636020 RRP12Q5JTH9 1297 aaKnown RBP21.21■□□□□ 0.99
CLN6-212ENST00000636020 RBM23Q86U06 439 aaKnown RBP21.21■□□□□ 0.99
CLN6-212ENST00000636020 CHRNA1P02708 482 aa21.2■□□□□ 0.98
CLN6-212ENST00000636020 HSPD1P10809 573 aaKnown RBP21.2■□□□□ 0.98
CLN6-212ENST00000636020 VPS53Q5VIR6 699 aa21.2■□□□□ 0.98
CLN6-212ENST00000636020 EHMT1Q9H9B1 1298 aa21.2■□□□□ 0.98
CLN6-212ENST00000636020 SETD4Q9NVD3 440 aa21.2■□□□□ 0.98
CLN6-212ENST00000636020 MRPL42Q9Y6G3 142 aaKnown RBP21.2■□□□□ 0.98
CLN6-212ENST00000636020 LGALS2P05162 132 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 TGFB3P10600 412 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 GNAT1P11488 350 aa21.19■□□□□ 0.98
CLN6-212ENST00000636020 UBA1P22314 1058 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms