RNA–Protein interactions for RNA: ENST00000635978.1

CHRNA7-208, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 903 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-208ENST00000635978 NAV1Q8NEY1 1877 aa8.4□□□□□ -1.07
CHRNA7-208ENST00000635978 FSD2A1L4K1 749 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 IFIT3O14879 490 aaKnown RBP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 ZBTB43O43298 467 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 KDM4AO75164 1064 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 CALM1P0DP23 149 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 CALM2P0DP24 149 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 CALM3P0DP25 149 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 CYP2C9P11712 490 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 IFNAR1P17181 557 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 SMPD1P17405 629 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 KCNA5P22460 613 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 SSTR3P32745 418 aaPredicted RBP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 RFC2P35250 354 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 METAP2P50579 478 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 UBE2HP62256 183 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 KRT85P78386 507 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 TNFAIP2Q03169 654 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 ZP2Q05996 745 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 PDE4BQ07343 736 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 COL19A1Q14993 1142 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 SEC23AQ15436 765 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 TMEM63BQ5T3F8 832 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 C12orf60Q5U649 245 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 SYNE3Q6ZMZ3 975 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 DEFB128Q7Z7B8 93 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 IQCA1Q86XH1 822 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 AMOTL1Q8IY63 956 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 FAM177A1Q8N128 213 aaPredicted RBP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 FAM133AQ8N9E0 248 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 KCTD12Q96CX2 325 aaKnown RBP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 SLF1Q9BQI6 1058 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 SUGCTQ9HAC7 445 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 ALG13Q9NP73 1137 aaKnown RBP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 TCP11L1Q9NUJ3 509 aa8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 TRMT13Q9NUP7 481 aaKnown RBP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 DDX49Q9Y6V7 483 aaKnown RBP8.39□□□□□ -1.07
CHRNA7-208ENST00000635978 TNKSO95271 1327 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 CCDC69A6NI79 296 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 USP17L12C9JPN9 530 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 USP17L21D6R901 530 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 CPLX1O14810 134 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 JAK2O60674 1132 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 DDAH1O94760 285 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 BAIAP3O94812 1187 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 ACTN1P12814 892 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 FOSBP53539 338 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 ZNF445P59923 1031 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 ERVK-21P61565 698 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 FOXK2Q01167 660 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 CNTN2Q02246 1040 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 CTDSPL2Q05D32 466 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 RESTQ13127 1097 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 STK3Q13188 491 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 PTGDRQ13258 359 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 GPNMBQ14956 572 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 WTAPQ15007 396 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 NTRK3Q16288 839 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 TSR1Q2NL82 804 aaKnown RBP8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 DGKHQ86XP1 1220 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 FBXO18Q8NFZ0 1043 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 WASF1Q92558 559 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 SYAP1Q96A49 352 aaPredicted RBP8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 CCDC17Q96LX7 622 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 ZSCAN10Q96SZ4 725 aaPredicted RBP8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 NUP88Q99567 741 aaPredicted RBP8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 UBAC1Q9BSL1 405 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 KANSL2Q9H9L4 492 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 SLC38A10Q9HBR0 1119 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 RBM28Q9NW13 759 aaKnown RBP8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 CFAP45Q9UL16 551 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 Q9Y3F1 56 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 SLC12A7Q9Y666 1083 aa8.38□□□□□ -1.07
CHRNA7-208ENST00000635978 ZDBF2Q9HCK1 2354 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 PLIN4Q96Q06 1357 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 ZFHX2Q9C0A1 2572 aaPredicted RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 PTPRSQ13332 1948 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 ZNF536O15090 1300 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 VPS37CA5D8V6 355 aaPredicted RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 SOWAHBA6NEL2 793 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 KIF28PB7ZC32 967 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 H3BQV1 296 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 DYNC1LI2O43237 492 aaPredicted RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 PRPF40AO75400 957 aaKnown RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 IQCF3P0C7M6 154 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 SUPT20HL2P0C7V6 817 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 FDPSP14324 419 aaKnown RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 NCLP19338 710 aaKnown RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 NOVP48745 357 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 CDK8P49336 464 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 WDR5P61964 334 aaKnown RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 CCT2P78371 535 aaKnown RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 L1TD1Q5T7N2 865 aaKnown RBP8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 TAPT1Q6NXT6 567 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 C16orf86Q6ZW13 317 aa8.37□□□□□ -1.07
CHRNA7-208ENST00000635978 CHST3Q7LGC8 479 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms