RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 CAPNS1P04632 268 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 RSPH10BP0C881 870 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 SPINK2P20155 84 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 MTHFRP42898 656 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 TIMM10P62072 90 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 CSTF1Q05048 431 aaKnown RBP7.32□□□□□ -1.24
LINC00649-220ENST00000628906 UBE3AQ05086 875 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 TRIM26Q12899 539 aaPredicted RBP7.32□□□□□ -1.24
LINC00649-220ENST00000628906 BTG3Q14201 252 aaPredicted RBP7.32□□□□□ -1.24
LINC00649-220ENST00000628906 CCDC6Q16204 474 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 TWISTNBQ3B726 338 aaPredicted RBP7.32□□□□□ -1.24
LINC00649-220ENST00000628906 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 PDE12Q6L8Q7 609 aaKnown RBP7.32□□□□□ -1.24
LINC00649-220ENST00000628906 NAA16Q6N069 864 aaPredicted RBP7.32□□□□□ -1.24
LINC00649-220ENST00000628906 C19orf48Q6RUI8 117 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 SLC4A10Q6U841 1118 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 TMEM179Q6ZVK1 233 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 ADGRA1Q86SQ6 560 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 PRPF38AQ8NAV1 312 aaKnown RBP7.32□□□□□ -1.24
LINC00649-220ENST00000628906 SPATA5Q8NB90 893 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 OR6J1Q8NGC5 347 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 MICAL1Q8TDZ2 1067 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 SRCIN1Q9C0H9 1055 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 RAI2Q9Y5P3 530 aa7.32□□□□□ -1.24
LINC00649-220ENST00000628906 LAMA1P25391 3075 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 MPHOSPH10O00566 681 aaKnown RBP7.31□□□□□ -1.24
LINC00649-220ENST00000628906 NKRFO15226 690 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00649-220ENST00000628906 NARSO43776 548 aaKnown RBP7.31□□□□□ -1.24
LINC00649-220ENST00000628906 GABBR2O75899 941 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 RFX1P22670 979 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 CCDC27Q2M243 656 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 COL28A1Q2UY09 1125 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 PI16Q6UXB8 463 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 CPXCR1Q8N123 301 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 PJA1Q8NG27 643 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 KAT2BQ92831 832 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 MS4A3Q96HJ5 214 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 PURBQ96QR8 312 aaKnown RBP7.31□□□□□ -1.24
LINC00649-220ENST00000628906 SLF1Q9BQI6 1058 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 SCNM1Q9BWG6 230 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 IGSF9Q9P2J2 1179 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 LRP2BPQ9P2M1 347 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 HDAC6Q9UBN7 1215 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 COG6Q9Y2V7 657 aa7.31□□□□□ -1.24
LINC00649-220ENST00000628906 ACACAQ13085 2346 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 IL16Q14005 1332 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 RAD50Q92878 1312 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 CACNA1FO60840 1977 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 FSCN2O14926 492 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 ZBED4O75132 1171 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 DGKIO75912 1065 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 C1QL1O75973 258 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 TOP3BO95985 862 aaKnown RBP7.3□□□□□ -1.24
LINC00649-220ENST00000628906 NTRK1P04629 796 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 CFHP08603 1231 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 SLC4A3P48751 1232 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 OAZ1P54368 228 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 ERVFC1P60507 584 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 FOXC1Q12948 553 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 FAM83BQ5T0W9 1011 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 RUFY4Q6ZNE9 571 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 ZNF605Q86T29 641 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 PROSER1Q86XN7 944 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 CELF5Q8N6W0 485 aaKnown RBP7.3□□□□□ -1.24
LINC00649-220ENST00000628906 APBB2Q92870 758 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 RNF25Q96BH1 459 aaPredicted RBP7.3□□□□□ -1.24
LINC00649-220ENST00000628906 ACSF2Q96CM8 615 aaPredicted RBP7.3□□□□□ -1.24
LINC00649-220ENST00000628906 FAM126AQ9BYI3 521 aaPredicted RBP7.3□□□□□ -1.24
LINC00649-220ENST00000628906 OSBPL7Q9BZF2 842 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 SLC38A10Q9HBR0 1119 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 RAVER2Q9HCJ3 691 aaKnown RBP7.3□□□□□ -1.24
LINC00649-220ENST00000628906 A1CFQ9NQ94 594 aaKnown RBP7.3□□□□□ -1.24
LINC00649-220ENST00000628906 RAB23Q9ULC3 237 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 PCDHB13Q9Y5F0 798 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
LINC00649-220ENST00000628906 MYH1P12882 1939 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 RALGAPA1Q6GYQ0 2036 aa7.3□□□□□ -1.24
LINC00649-220ENST00000628906 TTC3P53804 2025 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 TK2O00142 265 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 IGSF3O75054 1194 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 LRRN2O75325 713 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 CHRM1P11229 460 aaPredicted RBP7.29□□□□□ -1.24
LINC00649-220ENST00000628906 NCLP19338 710 aaKnown RBP7.29□□□□□ -1.24
LINC00649-220ENST00000628906 CHMP4BP1P59074 171 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 STARD6P59095 220 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 DYNLL1P63167 89 aaKnown RBP7.29□□□□□ -1.24
LINC00649-220ENST00000628906 ICA1Q05084 483 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 ATAT1Q5SQI0 421 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 KIAA1841Q6NSI8 718 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 PSAPL1Q6NUJ1 521 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 XRRA1Q6P2D8 792 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 CLEC10AQ8IUN9 316 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 CASP10Q92851 521 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 XAGE2Q96GT9 111 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 AAASQ9NRG9 546 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 SPATA6Q9NWH7 488 aaPredicted RBP7.29□□□□□ -1.24
LINC00649-220ENST00000628906 DBR1Q9UK59 544 aaKnown RBP7.29□□□□□ -1.24
LINC00649-220ENST00000628906 CA14Q9ULX7 337 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 PCDHB8Q9UN66 801 aa7.29□□□□□ -1.24
LINC00649-220ENST00000628906 LOC102724159A0A0B4J2E5 919 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms