RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 P2RX5Q93086 422 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 ZDHHC16Q969W1 377 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 KIFC2Q96AC6 838 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 KANSL2Q9H9L4 492 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 MCM9Q9NXL9 1143 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 HDAC6Q9UBN7 1215 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 GTF2IRD1Q9UHL9 959 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 LCTP09848 1927 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 EMSYQ7Z589 1322 aa8.5□□□□□ -1.05
TCF4-266ENST00000628689 RSPH10B2B2RC85 870 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 SLC30A4O14863 429 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 KINO60870 393 aaKnown RBP8.49□□□□□ -1.05
TCF4-266ENST00000628689 RSPH10BP0C881 870 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 ZAP70P43403 619 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 OAZ1P54368 228 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 RING1Q06587 406 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 ANKRD54Q6NXT1 300 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 POTEGQ6S5H5 508 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 TMEM184AQ6ZMB5 413 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 SIX5Q8N196 739 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 ZNF687Q8N1G0 1237 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 KLHL23Q8NBE8 558 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 SEPT8Q92599 483 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 CCDC17Q96LX7 622 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 RC3H2Q9HBD1 1191 aaKnown RBP8.49□□□□□ -1.05
TCF4-266ENST00000628689 PARD6AQ9NPB6 346 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 GPR108Q9NPR9 543 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 RNF146Q9NTX7 359 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 SWAP70Q9UH65 585 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 USP18Q9UMW8 372 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 ADGRA3Q8IWK6 1321 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 RAD50Q92878 1312 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 SDK1Q7Z5N4 2213 aa8.49□□□□□ -1.05
TCF4-266ENST00000628689 ZNF462Q96JM2 2506 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
TCF4-266ENST00000628689 POTEMA6NI47 508 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 C1QTNF9BB2RNN3 333 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 F5H6K3 240 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 TAF4O00268 1085 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 NKRFO15226 690 aaKnown RBP eCLIP8.48□□□□□ -1.05
TCF4-266ENST00000628689 NDUFB10O96000 172 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 C1QTNF9P0C862 333 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 TECP42680 631 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 KLRC3Q07444 240 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 KCNC3Q14003 757 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 BTG3Q14201 252 aaPredicted RBP8.48□□□□□ -1.05
TCF4-266ENST00000628689 DUSP6Q16828 381 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 NAALADL2Q58DX5 795 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 N4BP2L1Q5TBK1 243 aaPredicted RBP8.48□□□□□ -1.05
TCF4-266ENST00000628689 LURAP1LQ8IV03 231 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 ZDHHC14Q8IZN3 488 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 LRRC47Q8N1G4 583 aaKnown RBP8.48□□□□□ -1.05
TCF4-266ENST00000628689 KDF1Q8NAX2 398 aaPredicted RBP8.48□□□□□ -1.05
TCF4-266ENST00000628689 RIOK1Q9BRS2 568 aaKnown RBP8.48□□□□□ -1.05
TCF4-266ENST00000628689 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
TCF4-266ENST00000628689 POMKQ9H5K3 350 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 CYP39A1Q9NYL5 469 aa8.48□□□□□ -1.05
TCF4-266ENST00000628689 RALGAPA1Q6GYQ0 2036 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 MYH7BA7E2Y1 1941 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 IDH1O75874 414 aaKnown RBP8.47□□□□□ -1.05
TCF4-266ENST00000628689 UBTFL1P0CB47 393 aaPredicted RBP8.47□□□□□ -1.05
TCF4-266ENST00000628689 THPOP40225 353 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 CDK8P49336 464 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 TBC1D8BQ0IIM8 1120 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 HIC1Q14526 733 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 PPP2R5BQ15173 497 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 MUM1L1Q5H9M0 696 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 C1orf210Q8IVY1 113 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 MAML2Q8IZL2 1156 aaPredicted RBP8.47□□□□□ -1.05
TCF4-266ENST00000628689 C7orf31Q8N865 590 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 MICAL1Q8TDZ2 1067 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 AFG1LQ8WV93 481 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 ZNF689Q96CS4 500 aaPredicted RBP8.47□□□□□ -1.05
TCF4-266ENST00000628689 TRERF1Q96PN7 1200 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 FBXL21Q9UKT6 434 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 MRPL42Q9Y6G3 142 aaKnown RBP8.47□□□□□ -1.05
TCF4-266ENST00000628689 NBEAQ8NFP9 2946 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 PLXNA4Q9HCM2 1894 aa8.47□□□□□ -1.05
TCF4-266ENST00000628689 KIAA1671Q9BY89 1806 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 MMP3P08254 477 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 ALDH5A1P51649 535 aaPredicted RBP8.46□□□□□ -1.06
TCF4-266ENST00000628689 PDE4BQ07343 736 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 SOWAHCQ53LP3 525 aaPredicted RBP8.46□□□□□ -1.06
TCF4-266ENST00000628689 SPECC1Q5M775 1068 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 TTC39AQ5SRH9 613 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 UNQ6494/PRO21346Q6UXR6 183 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 NETO1Q8TDF5 533 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 SECISBP2LQ93073 1101 aaKnown RBP8.46□□□□□ -1.06
TCF4-266ENST00000628689 CDCA3Q99618 268 aaPredicted RBP8.46□□□□□ -1.06
TCF4-266ENST00000628689 ALG1Q9BT22 464 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 ADAM33Q9BZ11 813 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 DCP1AQ9NPI6 582 aaPredicted RBP8.46□□□□□ -1.06
TCF4-266ENST00000628689 DLGAP2Q9P1A6 1054 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 FEM1BQ9UK73 627 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 SPTA1P02549 2419 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 IGSF10Q6WRI0 2623 aa8.46□□□□□ -1.06
TCF4-266ENST00000628689 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.45□□□□□ -1.06
TCF4-266ENST00000628689 KRBA1A5PL33 1030 aa8.45□□□□□ -1.06
TCF4-266ENST00000628689 SRRM3A6NNA2 597 aaPredicted RBP8.45□□□□□ -1.06
TCF4-266ENST00000628689 PPFIA3O75145 1194 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms