RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 PPP1R7Q15435 360 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 CDC37Q16543 378 aaPredicted RBP15.22■□□□□ 0.03
UBE3A-209ENST00000625778 FIGNQ5HY92 759 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 SPATS2Q86XZ4 545 aaKnown RBP15.22■□□□□ 0.03
UBE3A-209ENST00000625778 DZIP1Q86YF9 867 aaKnown RBP15.22■□□□□ 0.03
UBE3A-209ENST00000625778 WHAMMQ8TF30 809 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 ACSBG1Q96GR2 724 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 SPAG5Q96R06 1193 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 NUDT12Q9BQG2 462 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 TMBIM4Q9HC24 238 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 LRRC4CQ9HCJ2 640 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 IL17RBQ9NRM6 502 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 ATP8A1Q9Y2Q0 1164 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 CCDC189A1A4V9 331 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 KRIT1O00522 736 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 SMTNP53814 917 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 HGSNATQ68CP4 663 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 MSL1Q68DK7 614 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 CENPPQ6IPU0 288 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 ZNF444Q8N0Y2 327 aaPredicted RBP15.22■□□□□ 0.03
UBE3A-209ENST00000625778 TCP11Q8WWU5 503 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 LARP4BQ92615 738 aaKnown RBP15.22■□□□□ 0.03
UBE3A-209ENST00000625778 DDX12PQ92771 950 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 SEC16BQ96JE7 1060 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 C7orf25Q9BPX7 421 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 NUP188Q5SRE5 1749 aa15.22■□□□□ 0.03
UBE3A-209ENST00000625778 GLI3P10071 1580 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 GRID2IPA4D2P6 1211 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 STXBP3O00186 592 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 SPTY2D1Q68D10 685 aaPredicted RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 HIBCHQ6NVY1 386 aaPredicted RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 NEK8Q86SG6 692 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 ZNF34Q8IZ26 560 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 USP38Q8NB14 1042 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 VEZTQ9HBM0 779 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 TSKSQ9UJT2 592 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 RAD21O60216 631 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 FGFR1OPO95684 399 aaKnown RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 MYL1P05976 194 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 TNNI2P48788 182 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 DHX9Q08211 1270 aaKnown RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 ZNF844Q08AG5 666 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 ASIC2Q16515 512 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 KCNK18Q7Z418 384 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 RAPGEF5Q92565 580 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 MMTAG2Q9BU76 263 aaKnown RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 LEMD3Q9Y2U8 911 aa15.21■□□□□ 0.03
UBE3A-209ENST00000625778 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.21■□□□□ 0.03
UBE3A-209ENST00000625778 DISP2A7MBM2 1401 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 SART1O43290 800 aaKnown RBP15.21■□□□□ 0.02
UBE3A-209ENST00000625778 TDP2O95551 362 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 CLTAP09496 248 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 EZRP15311 586 aaKnown RBP15.21■□□□□ 0.02
UBE3A-209ENST00000625778 IFNAR2P48551 515 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 UAP1Q16222 522 aaPredicted RBP15.21■□□□□ 0.02
UBE3A-209ENST00000625778 CALCRLQ16602 461 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 C3orf67Q6ZVT6 689 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 PLCD4Q9BRC7 762 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 FGFBP2Q9BYJ0 223 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 MAD2L2Q9UI95 211 aa15.21■□□□□ 0.02
UBE3A-209ENST00000625778 NPHP3-ACAD11A0A0J9YXS1 232 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 SERPING1P05155 500 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 KRT18P05783 430 aaKnown RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 GCKP35557 465 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 ZNF572Q7Z3I7 529 aaPredicted RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 TAX1BP1Q86VP1 789 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 NSUN4Q96CB9 384 aaKnown RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 FAM84BQ96KN1 310 aaPredicted RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 ENO4A6NNW6 628 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 TTI1O43156 1089 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 KIF1CO43896 1103 aaKnown RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 HNRNPH3P31942 346 aaKnown RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 FAM133BQ5BKY9 247 aaKnown RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 FUKQ8N0W3 1084 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 RNF10Q8N5U6 811 aaKnown RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 INPP4AQ96PE3 977 aaPredicted RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 TRIM51Q9BSJ1 452 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 BARHL2Q9NY43 387 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 SEC63Q9UGP8 760 aaKnown RBP15.2■□□□□ 0.02
UBE3A-209ENST00000625778 CHD4Q14839 1912 aa15.2■□□□□ 0.02
UBE3A-209ENST00000625778 FRMPD2Q68DX3 1309 aaPredicted RBP15.19■□□□□ 0.02
UBE3A-209ENST00000625778 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
UBE3A-209ENST00000625778 CTNND1O60716 968 aaKnown RBP15.19■□□□□ 0.02
UBE3A-209ENST00000625778 GRB10Q13322 594 aa15.19■□□□□ 0.02
UBE3A-209ENST00000625778 NAB2Q15742 525 aa15.19■□□□□ 0.02
UBE3A-209ENST00000625778 DCAF17Q5H9S7 520 aaPredicted RBP15.19■□□□□ 0.02
UBE3A-209ENST00000625778 MAPKAPK5Q8IW41 473 aa15.19■□□□□ 0.02
UBE3A-209ENST00000625778 MYOCDQ8IZQ8 938 aa15.19■□□□□ 0.02
UBE3A-209ENST00000625778 COA7Q96BR5 231 aa15.19■□□□□ 0.02
UBE3A-209ENST00000625778 LRRC45Q96CN5 670 aa15.19■□□□□ 0.02
UBE3A-209ENST00000625778 HVCN1Q96D96 273 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms