RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 FBXL5Q9UKA1 691 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 MKL2Q9ULH7 1088 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 ABCC6O95255 1503 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 GPR75-ASB3A0A0A6YYF3 556 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 A0A0G2JLW4 131 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 STXBP3O00186 592 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 TUBB4AP04350 444 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 TCF3P15923 654 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 GNL2Q13823 731 aaKnown RBP10.06□□□□□ -0.8
USB1-216ENST00000624720 BRD3Q15059 726 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 GRAMD4Q6IC98 578 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 FAM196AQ6ZSG2 479 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 YTHDF3Q7Z739 585 aaKnown RBP10.06□□□□□ -0.8
USB1-216ENST00000624720 FAM20CQ8IXL6 584 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 CCAR2Q8N163 923 aaKnown RBP10.06□□□□□ -0.8
USB1-216ENST00000624720 TRIML2Q8N7C3 387 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 CGREF1Q99674 301 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 COPRSQ9NQ92 184 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 L3MBTL1Q9Y468 752 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 ASB3Q9Y575 518 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 TOGARAM1Q9Y4F4 1720 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 MRC1P22897 1456 aa10.06□□□□□ -0.8
USB1-216ENST00000624720 SHOX2O60902 331 aaPredicted RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 IL6STP40189 918 aaPredicted RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 MTTPP55157 894 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 UBXN2AP68543 259 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 ERFEQ4G0M1 354 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 TBC1D9BQ66K14 1250 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 FUKQ8N0W3 1084 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 GOLM1Q8NBJ4 401 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 C7orf57Q8NEG2 295 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 LRRC2Q9BYS8 371 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 CNNM2Q9H8M5 875 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 CLK4Q9HAZ1 481 aaKnown RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 GPR108Q9NPR9 543 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 LGR5O75473 907 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 IFIT1P09914 478 aaKnown RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 S100A1P23297 94 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 SKIV2L2P42285 1042 aaKnown RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 CENPAP49450 140 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 CTSWP56202 376 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 WASHC4Q2M389 1173 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 TTC39AQ5SRH9 613 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 TMC4Q7Z404 712 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 ZNF554Q86TJ5 538 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 BRSK2Q8IWQ3 736 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 LRRC43Q8N309 656 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 LPIN2Q92539 896 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 STAMBPL1Q96FJ0 436 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 VPS50Q96JG6 964 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 MPHOSPH8Q99549 860 aa10.05□□□□□ -0.8
USB1-216ENST00000624720 NAT10Q9H0A0 1025 aaKnown RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 NSRP1Q9H0G5 558 aaKnown RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 OSBPL5Q9H0X9 879 aaPredicted RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 DMAP1Q9NPF5 467 aaPredicted RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 TRPC5Q9UL62 973 aaPredicted RBP10.05□□□□□ -0.8
USB1-216ENST00000624720 C19orf81C9J6K1 198 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 RASA4BC9J798 803 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 CAMTA2O94983 1202 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 PCCAP05165 728 aaPredicted RBP10.04□□□□□ -0.8
USB1-216ENST00000624720 PCP11498 1178 aaKnown RBP10.04□□□□□ -0.8
USB1-216ENST00000624720 PCNAP12004 261 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 RXRBP28702 533 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 P3H1Q32P28 736 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 FAM209AQ5JX71 171 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 ZNF449Q6P9G9 518 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 RASGRP2Q7LDG7 609 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 LURAP1LQ8IV03 231 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 SPERTQ8NA61 448 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 NAF1Q96HR8 494 aaKnown RBP10.04□□□□□ -0.8
USB1-216ENST00000624720 OSBPL1AQ9BXW6 950 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 LRRC4BQ9NT99 713 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 PKD1L3Q7Z443 1732 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 PARP4Q9UKK3 1724 aaKnown RBP10.04□□□□□ -0.8
USB1-216ENST00000624720 DPPA5A6NC42 116 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 ZPR1O75312 459 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 PAHP00439 452 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 HOXC13P31276 330 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 ETV3P41162 512 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 CD97P48960 835 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 USP46P62068 366 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 IGBP1P78318 339 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 FAM173BQ6P4H8 233 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 DPH6Q7L8W6 267 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 NAP1L4Q99733 375 aaKnown RBP10.04□□□□□ -0.8
USB1-216ENST00000624720 NDEL1Q9GZM8 345 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 EPC1Q9H2F5 836 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 C2orf81A6NN90 581 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 IDH1O75874 414 aaKnown RBP10.04□□□□□ -0.8
USB1-216ENST00000624720 GEMIN4P57678 1058 aaKnown RBP10.04□□□□□ -0.8
USB1-216ENST00000624720 HAND2P61296 217 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 STK3Q13188 491 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 PRKG1Q13976 671 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 TMTC4Q5T4D3 741 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 CHST3Q7LGC8 479 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 DGLUCYQ7Z3D6 616 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 CCDC144CPQ8IYA2 1237 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms