RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 APBA2Q99767 749 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 PANK2Q9BZ23 570 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 TBC1D22BQ9NU19 505 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 GPR25O00155 361 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 CHMP2AO43633 222 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 MAP2K1Q02750 393 aaPredicted RBP20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 PPP2R5CQ13362 524 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 ZRSR1Q15695 479 aaKnown RBP20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 KRT79Q5XKE5 535 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 OTOP1Q7RTM1 612 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 SDF4Q9BRK5 362 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 TINF2Q9BSI4 451 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 CCSER1Q9C0I3 900 aa20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.05■□□□□ 0.8
PTCHD3-202ENST00000622555 POLR2DO15514 142 aaKnown RBP20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 DHX15O43143 795 aaKnown RBP20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 KINO60870 393 aaKnown RBP20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 ZNF202O95125 648 aa20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 KCNA2P16389 499 aa20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 MSL3Q8N5Y2 521 aaKnown RBP20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 SNX29Q8TEQ0 813 aa20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 BEGAINQ9BUH8 593 aa20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 UNC45AQ9H3U1 944 aa20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 DDX19AQ9NUU7 478 aaKnown RBP20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 TCEAL9Q9UHQ7 104 aa20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 SYNGAP1Q96PV0 1343 aa20.04■□□□□ 0.8
PTCHD3-202ENST00000622555 KARSQ15046 597 aaKnown RBP20.03■□□□□ 0.8
PTCHD3-202ENST00000622555 ERMNQ8TAM6 284 aa20.03■□□□□ 0.8
PTCHD3-202ENST00000622555 CD99L2Q8TCZ2 262 aa20.03■□□□□ 0.8
PTCHD3-202ENST00000622555 SYAP1Q96A49 352 aaPredicted RBP20.03■□□□□ 0.8
PTCHD3-202ENST00000622555 MMTAG2Q9BU76 263 aaKnown RBP20.03■□□□□ 0.8
PTCHD3-202ENST00000622555 VTA1Q9NP79 307 aa20.03■□□□□ 0.8
PTCHD3-202ENST00000622555 CCDC39Q9UFE4 941 aa20.03■□□□□ 0.8
PTCHD3-202ENST00000622555 A0A087X0B3 334 aa20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 EML1O00423 815 aa20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 SNAI1O95863 264 aaPredicted RBP20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 KCNV1Q6PIU1 500 aa20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 CALML4Q96GE6 196 aa20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 FLRT1Q9NZU1 646 aa20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 TMEM63CQ9P1W3 806 aa20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 CASP8AP2Q9UKL3 1982 aa20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 NFASCO94856 1347 aa20.02■□□□□ 0.8
PTCHD3-202ENST00000622555 TGFB3P10600 412 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 CCT6AP40227 531 aaKnown RBP20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 CAP1Q01518 475 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 SP2Q02086 613 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 CCL14Q16627 93 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 HAUS3Q68CZ6 603 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 DHX58Q96C10 678 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 CDK5RAP3Q96JB5 506 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 PLIN2Q99541 437 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 SENP7Q9BQF6 1050 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 PYM1Q9BRP8 204 aaKnown RBP20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 GABRQQ9UN88 632 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 STK24Q9Y6E0 443 aa20.02■□□□□ 0.79
PTCHD3-202ENST00000622555 SORBS3O60504 671 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 FKTNO75072 461 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 UBA1P22314 1058 aaKnown RBP20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 FLT3LGP49771 235 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 KRT76Q01546 638 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 PRKCZQ05513 592 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 OLFML2BQ68BL8 750 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 B3GNT9Q6UX72 402 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 MIER3Q7Z3K6 550 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 SCFD2Q8WU76 684 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 JPH1Q9HDC5 661 aaPredicted RBP20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 PDGFCQ9NRA1 345 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 DISC1Q9NRI5 854 aa20.01■□□□□ 0.79
PTCHD3-202ENST00000622555 FSD2A1L4K1 749 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 TTLL4Q14679 1199 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 LY6KQ17RY6 165 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 LONRF3Q496Y0 759 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 CCDC183Q5T5S1 534 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 RRAGBQ5VZM2 374 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 IQUBQ8NA54 791 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 GIMAP8Q8ND71 665 aaPredicted RBP20■□□□□ 0.79
PTCHD3-202ENST00000622555 ERO1AQ96HE7 468 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 NUP62CLQ9H1M0 184 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 ABHD16BQ9H3Z7 469 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 CLSTN2Q9H4D0 955 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 BCAS3Q9H6U6 928 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 SERTAD1Q9UHV2 236 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 TSKSQ9UJT2 592 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 DDX41Q9UJV9 622 aaKnown RBP20■□□□□ 0.79
PTCHD3-202ENST00000622555 SAMM50Q9Y512 469 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 WDR81Q562E7 1941 aa20■□□□□ 0.79
PTCHD3-202ENST00000622555 ARIH2O95376 493 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 XRCC5P13010 732 aaKnown RBP19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 PLCG1P19174 1290 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 STAT6P42226 847 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 NEDD9Q14511 834 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 CAMK4Q16566 473 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 TAPT1Q6NXT6 567 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 KRBA2Q6ZNG9 492 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 CYFIP1Q7L576 1253 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 ZNF296Q8WUU4 475 aaPredicted RBP19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 TIGD1Q96MW7 591 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 EIF2AK1Q9BQI3 630 aaKnown RBP19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 KATNBL1Q9H079 304 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 SLC9A2Q9UBY0 812 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms