RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PANK4Q9NVE7 773 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 SPATA7Q9P0W8 599 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 HDAC6Q9UBN7 1215 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 ADD3Q9UEY8 706 aaKnown RBP8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 ITGB1BP2Q9UKP3 347 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 GUCA1BQ9UMX6 200 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 LRRC42Q9Y546 428 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 SLC4A4Q9Y6R1 1079 aa8.21□□□□□ -1.09
TRIM49B-202ENST00000622138 COL1A1P02452 1464 aaPredicted RBP8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 MYH6P13533 1939 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 MROH5Q6ZUA9 1318 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 PDE2AO00408 941 aaPredicted RBP8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 TEX33O43247 280 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 KRT86O43790 486 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 ATP2C2O75185 946 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 PRDM1O75626 825 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 NDUFA10O95299 355 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 ABL1P00519 1130 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 VIL1P09327 827 aaKnown RBP8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 PRLRP16471 622 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 PLCD1P51178 756 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 ATP11AP98196 1134 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 MAP3K12Q12852 859 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 DPYDQ12882 1025 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 TMEM132AQ24JP5 1023 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 CCDC92Q53HC0 331 aaPredicted RBP8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 SH2D4BQ5SQS7 431 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 ERICH1Q86X53 443 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 IFT20Q8IY31 132 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 ZNF654Q8IZM8 581 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 CENPTQ96BT3 561 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 NDNQ99608 321 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 FOXP1Q9H334 677 aaPredicted RBP8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 TRPV5Q9NQA5 729 aa8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 UTP6Q9NYH9 597 aaKnown RBP8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 DMGDHQ9UI17 866 aaKnown RBP8.21□□□□□ -1.1
TRIM49B-202ENST00000622138 BCL9LQ86UU0 1499 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 WTIPA6NIX2 430 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 ENC1O14682 589 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 ASAP2O43150 1006 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 CEP104O60308 925 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SRGAP2O75044 1071 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 COBLO75128 1261 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 ZNF189O75820 626 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SLC5A1P13866 664 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 ZFXP17010 805 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 ALDH5A1P51649 535 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 STX17P56962 302 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 EVA1CP58658 441 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 PPP2R2AP63151 447 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 EVX2Q03828 476 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 TSNAXIP1Q2TAA8 658 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SUSD4Q5VX71 490 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 IRGCQ6NXR0 463 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 RUFY4Q6ZNE9 571 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 CPLX4Q7Z7G2 160 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 TBC1D1Q86TI0 1168 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SMYD4Q8IYR2 804 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 ZNF34Q8IZ26 560 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SPATA20Q8TB22 786 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 FBF1Q8TES7 1133 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 NOC3LQ8WTT2 800 aaKnown RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 DYDC1Q8WWB3 177 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 WASF1Q92558 559 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SLC35B4Q969S0 331 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 EPSTI1Q96J88 318 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SLF1Q9BQI6 1058 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 LRRC1Q9BTT6 524 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 KRT23Q9C075 422 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 CNNM2Q9H8M5 875 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 CNOT10Q9H9A5 744 aaKnown RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 CABP5Q9NP86 173 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 PLCB1Q9NQ66 1216 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 VPS54Q9P1Q0 977 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 BIN2Q9UBW5 565 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 IQSEC3Q9UPP2 1182 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 TMEM98Q9Y2Y6 226 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SRPRBQ9Y5M8 271 aaKnown RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 EPN1Q9Y6I3 576 aaPredicted RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 PNPLA7Q6ZV29 1317 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 CYP2D7A0A087X1C5 515 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 LRRC10BA6NIK2 292 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 USO1O60763 962 aaKnown RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 PLEKHA8P1O95397 391 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 DEXIO95424 95 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 GBP1P32455 592 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 STAT6P42226 847 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 FXR1P51114 621 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 POLE2P56282 527 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 KRT83P78385 493 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 PPARAQ07869 468 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 PRPF4BQ13523 1007 aaKnown RBP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 MYBPC2Q14324 1141 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SAFBQ15424 915 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 SEC23AQ15436 765 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 PKN1Q16512 942 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 RILPL1Q5EBL4 403 aa8.2□□□□□ -1.1
TRIM49B-202ENST00000622138 C8orf74Q6P047 294 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms