RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 HNRNPH1P31943 449 aaKnown RBP17.35■□□□□ 0.37
NPHP4-211ENST00000622020 SPTY2D1Q68D10 685 aaPredicted RBP17.35■□□□□ 0.37
NPHP4-211ENST00000622020 PIK3R5Q8WYR1 880 aa17.35■□□□□ 0.37
NPHP4-211ENST00000622020 KIAA1024Q9UPX6 916 aa17.35■□□□□ 0.37
NPHP4-211ENST00000622020 F8W031 263 aaPredicted RBP17.34■□□□□ 0.37
NPHP4-211ENST00000622020 FKBP3Q00688 224 aaKnown RBP17.34■□□□□ 0.37
NPHP4-211ENST00000622020 PAK2Q13177 524 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 GBP6Q6ZN66 633 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 MMS22LQ6ZRQ5 1243 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 IQCKQ8N0W5 287 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 KRT18P05783 430 aaKnown RBP17.34■□□□□ 0.37
NPHP4-211ENST00000622020 HDLBPQ00341 1268 aaKnown RBP17.34■□□□□ 0.37
NPHP4-211ENST00000622020 IFT88Q13099 833 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 FAM182BQ5T319 152 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 TTBK2Q6IQ55 1244 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 CAVIN3Q969G5 261 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 SPZ1Q9BXG8 430 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 TRIM31Q9BZY9 425 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 SLC9A1P19634 815 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 STAT3P40763 770 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 LRRC63Q05C16 580 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 ADAT2Q7Z6V5 191 aaKnown RBP17.34■□□□□ 0.37
NPHP4-211ENST00000622020 ANKS1AQ92625 1134 aa17.34■□□□□ 0.37
NPHP4-211ENST00000622020 DDX47Q9H0S4 455 aaKnown RBP17.34■□□□□ 0.37
NPHP4-211ENST00000622020 PVALEFA0A1B0GWK0 134 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 GRID2IPA4D2P6 1211 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 PJA2O43164 708 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 SERPING1P05155 500 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 TMOD1P28289 359 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 ADCY7P51828 1080 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 ODF2Q5BJF6 829 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 NAA35Q5VZE5 725 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 KCNV1Q6PIU1 500 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 GDF3Q9NR23 364 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 ATP6V0A2Q9Y487 856 aa17.33■□□□□ 0.37
NPHP4-211ENST00000622020 POTEB3A0JP26 581 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 POTECB2RU33 542 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 PPP1R2P41236 205 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 ADAM9Q13443 819 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 TCERG1LQ5VWI1 586 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 POTEBQ6S5H4 581 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 CLEC4GQ6UXB4 293 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 ZNF572Q7Z3I7 529 aaPredicted RBP17.33■□□□□ 0.36
NPHP4-211ENST00000622020 DHX37Q8IY37 1157 aaKnown RBP17.33■□□□□ 0.36
NPHP4-211ENST00000622020 TAF4BQ92750 862 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 BCAS3Q9H6U6 928 aa17.33■□□□□ 0.36
NPHP4-211ENST00000622020 MEIS1O00470 390 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 PTK2Q05397 1052 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 ITIH3Q06033 890 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 NAB2Q15742 525 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 DCAF17Q5H9S7 520 aaPredicted RBP17.32■□□□□ 0.36
NPHP4-211ENST00000622020 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
NPHP4-211ENST00000622020 AMIGO3Q86WK7 504 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 CEP72Q9P209 647 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 CASZ1Q86V15 1759 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 FLT3P36888 993 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 SPAG5Q96R06 1193 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 STK17AQ9UEE5 414 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 DDX25Q9UHL0 483 aaKnown RBP17.32■□□□□ 0.36
NPHP4-211ENST00000622020 PCDHA12Q9UN75 941 aa17.32■□□□□ 0.36
NPHP4-211ENST00000622020 SSU72P8A0A1W2PR75 194 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 GUCY2CP25092 1073 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 SLC18A3Q16572 532 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 UBLCP1Q8WVY7 318 aaPredicted RBP17.31■□□□□ 0.36
NPHP4-211ENST00000622020 DNAJC19Q96DA6 116 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 RAB34Q9BZG1 259 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L15C9J2P7 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L13C9JLJ4 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L11C9JVI0 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L18D6R9N7 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L22D6RA61 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L17D6RBQ6 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L19D6RCP7 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L20D6RJB6 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 GNPATO15228 680 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L24Q0WX57 530 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 RPS6KA1Q15418 735 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 ASIC2Q16515 512 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 MEI1Q5TIA1 1274 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 USP17L6PQ6QN14 398 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 KCTD1Q719H9 257 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 RNF10Q8N5U6 811 aaKnown RBP17.31■□□□□ 0.36
NPHP4-211ENST00000622020 WDR66Q8TBY9 1149 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 ZNF473Q8WTR7 871 aaKnown RBP17.31■□□□□ 0.36
NPHP4-211ENST00000622020 CCT8L2Q96SF2 557 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 LZTS2Q9BRK4 669 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 NEUROG2Q9H2A3 272 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 EPB41P11171 864 aaKnown RBP17.31■□□□□ 0.36
NPHP4-211ENST00000622020 PDHBP11177 359 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 ITGA4P13612 1032 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 SKOR1P84550 965 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 KCNH2Q12809 1159 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 GJB7Q6PEY0 223 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 GPBP1Q86WP2 473 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 HAS1Q92839 578 aa17.31■□□□□ 0.36
NPHP4-211ENST00000622020 PPP1R37O75864 691 aa17.3■□□□□ 0.36
NPHP4-211ENST00000622020 CASP5P51878 434 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms