RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 DPH5Q9H2P9 285 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 VIPAS39Q9H9C1 493 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 DDX25Q9UHL0 483 aaKnown RBP17.68■□□□□ 0.42
DKC1-213ENST00000620277 PCDHA12Q9UN75 941 aa17.68■□□□□ 0.42
DKC1-213ENST00000620277 SHANK3Q9BYB0 1731 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 ERLIN2O94905 339 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 TCP1P17987 556 aaKnown RBP17.67■□□□□ 0.42
DKC1-213ENST00000620277 ADAM9Q13443 819 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 PLS1Q14651 629 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 USH1GQ495M9 461 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 GPBP1Q86WP2 473 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 CAPN7Q9Y6W3 813 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 CASP5P51878 434 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 CASKIN2Q8WXE0 1202 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 RAD54LQ92698 747 aa17.67■□□□□ 0.42
DKC1-213ENST00000620277 TIAM2Q8IVF5 1701 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 RAD51CO43502 376 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 MNAT1P51948 309 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 PPFIA1Q13136 1202 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 TBC1D10BQ4KMP7 808 aaPredicted RBP17.66■□□□□ 0.42
DKC1-213ENST00000620277 CHADLQ6NUI6 762 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 LRRC55Q6ZSA7 311 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 CCDC84Q86UT8 332 aaPredicted RBP17.66■□□□□ 0.42
DKC1-213ENST00000620277 FNBP4Q8N3X1 1017 aaPredicted RBP17.66■□□□□ 0.42
DKC1-213ENST00000620277 ARHGEF1Q92888 912 aaKnown RBP17.66■□□□□ 0.42
DKC1-213ENST00000620277 RPGRIP1Q96KN7 1286 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 COL4A3BPQ9Y5P4 624 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 BCL9LQ86UU0 1499 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 ABCB4P21439 1286 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 TMOD1P28289 359 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 EPHB4P54760 987 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 PSMC6P62333 389 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 TADA2BQ86TJ2 420 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 RDH13Q8NBN7 331 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 PURBQ96QR8 312 aaKnown RBP17.66■□□□□ 0.42
DKC1-213ENST00000620277 ZNF219Q9P2Y4 722 aaPredicted RBP17.66■□□□□ 0.42
DKC1-213ENST00000620277 PCDHB13Q9Y5F0 798 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 ZNF233A6NK53 670 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 EDIL3O43854 480 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 KCNA1Q09470 495 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 HGSNATQ68CP4 663 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
DKC1-213ENST00000620277 WDR66Q8TBY9 1149 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 PPM1EQ8WY54 764 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 AK8Q96MA6 479 aa17.66■□□□□ 0.42
DKC1-213ENST00000620277 E7EVH7 732 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 PDHBP11177 359 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 GPSM2P81274 684 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 MMGT1Q8N4V1 131 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 UBLCP1Q8WVY7 318 aaPredicted RBP17.65■□□□□ 0.42
DKC1-213ENST00000620277 CELF4Q9BZC1 486 aaKnown RBP17.65■□□□□ 0.42
DKC1-213ENST00000620277 OPA1O60313 960 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 NOL4O94818 638 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 RFC4P35249 363 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 TAF4BQ92750 862 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 BCORQ6W2J9 1755 aa17.65■□□□□ 0.42
DKC1-213ENST00000620277 EIF3HO15372 352 aaKnown RBP eCLIP17.64■□□□□ 0.41
DKC1-213ENST00000620277 PPP1R11O60927 126 aaPredicted RBP17.64■□□□□ 0.41
DKC1-213ENST00000620277 ITGA4P13612 1032 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 INPP5BP32019 993 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 PRPHP41219 470 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 ADGRF4Q8IZF3 695 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 BMP2KQ9NSY1 1161 aaPredicted RBP17.64■□□□□ 0.41
DKC1-213ENST00000620277 PLAAQ9Y263 795 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 DISP2A7MBM2 1401 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 FLT3P36888 993 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 FKBP3Q00688 224 aaKnown RBP17.64■□□□□ 0.41
DKC1-213ENST00000620277 PTK2Q05397 1052 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 IFT88Q13099 833 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 IFT20Q8IY31 132 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 RTFDC1Q9BY42 306 aaPredicted RBP17.64■□□□□ 0.41
DKC1-213ENST00000620277 PAPPAQ13219 1627 aa17.64■□□□□ 0.41
DKC1-213ENST00000620277 RSPH10B2B2RC85 870 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 RSPH10BP0C881 870 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 NR2F2P24468 414 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 TM4SF1P30408 202 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 UBXN2AP68543 259 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 DOK7Q18PE1 504 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 PRR16Q569H4 304 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 CLEC4GQ6UXB4 293 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 MAEAQ7L5Y9 396 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 GUF1Q8N442 669 aaKnown RBP17.63■□□□□ 0.41
DKC1-213ENST00000620277 C8orf37Q96NL8 207 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 GRIN2DO15399 1336 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 LAD1O00515 517 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 CHMP2AO43633 222 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 KCNH2Q12809 1159 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 IPO4Q8TEX9 1081 aaKnown RBP17.63■□□□□ 0.41
DKC1-213ENST00000620277 HAS1Q92839 578 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 MTMR9Q96QG7 549 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 LRRC4CQ9HCJ2 640 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 GOPCQ9HD26 462 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 CD209Q9NNX6 404 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 AMACRQ9UHK6 382 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
DKC1-213ENST00000620277 ASIC2Q16515 512 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 NBPF9Q3BBW0 867 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 ZNF804AQ7Z570 1209 aa17.63■□□□□ 0.41
DKC1-213ENST00000620277 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
DKC1-213ENST00000620277 EMILIN3Q9NT22 766 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms