RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 WDR59Q6PJI9 974 aa13.77□□□□□ -0.2
CIITA-212ENST00000618207 SAMD7Q7Z3H4 446 aa13.77□□□□□ -0.2
CIITA-212ENST00000618207 GUF1Q8N442 669 aaKnown RBP13.77□□□□□ -0.2
CIITA-212ENST00000618207 JDP2Q8WYK2 163 aa13.77□□□□□ -0.2
CIITA-212ENST00000618207 NDST4Q9H3R1 872 aa13.77□□□□□ -0.2
CIITA-212ENST00000618207 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.2
CIITA-212ENST00000618207 KDM3AQ9Y4C1 1321 aa13.77□□□□□ -0.2
CIITA-212ENST00000618207 NDUFA10O95299 355 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
CIITA-212ENST00000618207 TRIM14Q14142 442 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 RASA3Q14644 834 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 SLFN12Q8IYM2 578 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 NOC3LQ8WTT2 800 aaKnown RBP13.77□□□□□ -0.21
CIITA-212ENST00000618207 CCDC51Q96ER9 411 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 AGBL1Q96MI9 1066 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 BHMT2Q9H2M3 363 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
CIITA-212ENST00000618207 PIM2Q9P1W9 311 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 BCS1LQ9Y276 419 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 SREBF1P36956 1147 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 CAP2P40123 477 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 CASP5P51878 434 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 APBA1Q02410 837 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.21
CIITA-212ENST00000618207 ARSHQ5FYA8 562 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 TPH2Q8IWU9 490 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 CCDC65Q8IXS2 484 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 CCDC94Q9BW85 323 aaPredicted RBP13.77□□□□□ -0.21
CIITA-212ENST00000618207 PRDM10Q9NQV6 1147 aa13.77□□□□□ -0.21
CIITA-212ENST00000618207 PPP2R3AQ06190 1150 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 SPIRE1Q08AE8 756 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 TBC1D10BQ4KMP7 808 aaPredicted RBP13.76□□□□□ -0.21
CIITA-212ENST00000618207 CIAPIN1Q6FI81 312 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 TSG101Q99816 390 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 VCPKMTQ9H867 229 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 MYOZ2Q9NPC6 264 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 NLRC4Q9NPP4 1024 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 CAPN11Q9UMQ6 739 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 DNM3Q9UQ16 869 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 VGLL3A8MV65 326 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 ENC1O14682 589 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 SPATA31C1P0DKV0 1188 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 INPP5BP32019 993 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 VWA3BQ502W6 1294 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 HAUS3Q68CZ6 603 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 KRT26Q7Z3Y9 468 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 CRYGNQ8WXF5 182 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 WDR18Q9BV38 432 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 LRRC27Q9C0I9 530 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 IKZF4Q9H2S9 585 aa13.76□□□□□ -0.21
CIITA-212ENST00000618207 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
CIITA-212ENST00000618207 REXO2Q9Y3B8 237 aaKnown RBP13.76□□□□□ -0.21
CIITA-212ENST00000618207 CYP3A7-CYP3A51PA0A087WV96 503 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 GCOM1H8Y6P7 765 aaPredicted RBP13.75□□□□□ -0.21
CIITA-212ENST00000618207 FOSP01100 380 aaPredicted RBP13.75□□□□□ -0.21
CIITA-212ENST00000618207 TUBB4AP04350 444 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 POLR2MP0CAP2 368 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 CYP3A7P24462 503 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 BTNL9Q6UXG8 535 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 NAP1L4Q99733 375 aaKnown RBP13.75□□□□□ -0.21
CIITA-212ENST00000618207 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
CIITA-212ENST00000618207 PRPF6O94906 941 aaKnown RBP13.75□□□□□ -0.21
CIITA-212ENST00000618207 LRRC55Q6ZSA7 311 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 KIAA1328Q86T90 577 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 LDHDQ86WU2 507 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 ERMNQ8TAM6 284 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
CIITA-212ENST00000618207 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 DUSP10Q9Y6W6 482 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 ABCB11O95342 1321 aa13.75□□□□□ -0.21
CIITA-212ENST00000618207 SLC12A3P55017 1021 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 EHHADHQ08426 723 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 LRCH2Q5VUJ6 765 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 MAEAQ7L5Y9 396 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 SCFD1Q8WVM8 642 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 SH2D3AQ9BRG2 576 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 NHEJ1Q9H9Q4 299 aaPredicted RBP13.74□□□□□ -0.21
CIITA-212ENST00000618207 MRFAP1Q9Y605 127 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 PPP1R2P41236 205 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 ARHGAP25P42331 645 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 KCNA1Q09470 495 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 DALRD3Q5D0E6 543 aaKnown RBP13.74□□□□□ -0.21
CIITA-212ENST00000618207 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 RUSC1Q9BVN2 902 aa13.74□□□□□ -0.21
CIITA-212ENST00000618207 ARP10275 920 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 RPA1P27694 616 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 POLD1P28340 1107 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 FKBP3Q00688 224 aaKnown RBP13.73□□□□□ -0.21
CIITA-212ENST00000618207 RASSF7Q02833 373 aa13.73□□□□□ -0.21
CIITA-212ENST00000618207 ARID5AQ03989 594 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms