RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SYNCQ9H7C4 482 aa14.48□□□□□ -0.09
PPP4R3B-206ENST00000616407 PSMC2P35998 433 aaKnown RBP14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 GNPTABQ3T906 1256 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 IFT20Q8IY31 132 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 PKNOX2Q96KN3 472 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 NYAP2Q9P242 653 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 SMARCA1P28370 1054 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 CXCR5P32302 372 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 GABPB1Q06547 395 aaPredicted RBP14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 DALRD3Q5D0E6 543 aaKnown RBP14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 CCDC26Q8TAB7 109 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 CHP1Q99653 195 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 MYMKA6NI61 221 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 ANKRD35Q8N283 1001 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 PAGR1Q9BTK6 254 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 PCIF1Q9H4Z3 704 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 ADAMTS1Q9UHI8 967 aa14.47□□□□□ -0.09
PPP4R3B-206ENST00000616407 ZMYND10O75800 440 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 MOCS3O95396 460 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 DAAM2Q86T65 1068 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 CCDC50Q8IVM0 306 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 DAGLBQ8NCG7 672 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 C7orf25Q9BPX7 421 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 LRRC4BQ9NT99 713 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 PIM2Q9P1W9 311 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 HERC5Q9UII4 1024 aaKnown RBP14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 NOP56O00567 594 aaKnown RBP14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 KCNJ6P48051 423 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 IRX3P78415 501 aaPredicted RBP14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 DDR1Q08345 913 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 GIMAP8Q8ND71 665 aaPredicted RBP14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 PCDHA13Q9Y5I0 950 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 TNNI1P19237 187 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 DPH6Q7L8W6 267 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 PPM1KQ8N3J5 372 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 EPC1Q9H2F5 836 aa14.46□□□□□ -0.09
PPP4R3B-206ENST00000616407 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 ARHGAP27Q6ZUM4 889 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 RSPH14Q9UHP6 348 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 ESYT2A0FGR8 921 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 TLDC2A0PJX2 215 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 POLRMTO00411 1230 aaKnown RBP14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 ZBTB7AO95365 584 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 SEMA3FQ13275 785 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 LONRF2Q1L5Z9 754 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 PROM2Q8N271 834 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 A0A1W2PQC6 194 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 DLATP10515 647 aaKnown RBP14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 SEL1L2Q5TEA6 688 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 RAD9BQ6WBX8 426 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 SYCE1Q8N0S2 351 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 MTUS1Q9ULD2 1270 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 CSADQ9Y600 493 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 ATRNO75882 1429 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 ADAMTSL3P82987 1691 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 A0A087X0B3 334 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 GOLGA6BA6NDN3 693 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 LRRC53A6NM62 1247 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 ZEB2O60315 1214 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 MYZAPP0CAP1 466 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 FAM76AQ8TAV0 307 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 DYDC2Q96IM9 177 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 AZI2Q9H6S1 392 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 GCNT4Q9P109 453 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 AMFRQ9UKV5 643 aa14.45□□□□□ -0.1
PPP4R3B-206ENST00000616407 NPHP3-ACAD11A0A0J9YXS1 232 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 SLC37A4O43826 429 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 HOXA7P31268 230 aaPredicted RBP14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 ZNF408Q9H9D4 720 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 RGL1Q9NZL6 768 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 DDX41Q9UJV9 622 aaKnown RBP14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 CYTH3O43739 400 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 GYPCP04921 128 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 PPP4R3CPQ6ZMV5 832 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 CCDC25Q86WR0 208 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 UBLCP1Q8WVY7 318 aaPredicted RBP14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 GLG1Q92896 1179 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 NAP1L3Q99457 506 aaPredicted RBP14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 RAVER2Q9HCJ3 691 aaKnown RBP14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 PNMA2Q9UL42 364 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 BZW2Q9Y6E2 419 aaKnown RBP14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 USP14P54578 494 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 NYAP1Q6ZVC0 841 aa14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 AFDNP55196 1824 aaKnown RBP14.44□□□□□ -0.1
PPP4R3B-206ENST00000616407 SMIM23A6NLE4 172 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 LRRN2O75325 713 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 ENTPD3O75355 529 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 PLCB3Q01970 1234 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 DMP1Q13316 513 aaPredicted RBP14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 DEPTORQ8TB45 409 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 CAPN11Q9UMQ6 739 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 SCAF8Q9UPN6 1271 aaKnown RBP14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 JRKLQ9Y4A0 524 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 SRGAP2O75044 1071 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 GFPT2O94808 682 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 FTCDO95954 541 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 SERPING1P05155 500 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 MYL7Q01449 175 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 KCNH2Q12809 1159 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 RNF187Q5TA31 235 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms