RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 LMAN2LQ9H0V9 348 aa20.48■□□□□ 0.87
TRAPPC3-209ENST00000616395 ATG2AQ2TAZ0 1938 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 TRIM6-TRIM34B2RNG4 842 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 C5orf67F2Z3F1 127 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 RB1P06400 928 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 LINC00271P0C7V0 271 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 ZNF543Q08ER8 600 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 ZMYM1Q5SVZ6 1142 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 SYTL5Q8TDW5 730 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 IL17RAQ96F46 866 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 C11orf84Q9BUA3 381 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 DAXXQ9UER7 740 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 MRVI1Q9Y6F6 885 aa20.47■□□□□ 0.87
TRAPPC3-209ENST00000616395 RALGAPA2Q2PPJ7 1873 aa20.46■□□□□ 0.87
TRAPPC3-209ENST00000616395 ZFHX2Q9C0A1 2572 aaPredicted RBP20.46■□□□□ 0.87
TRAPPC3-209ENST00000616395 BMPR1AP36894 532 aa20.46■□□□□ 0.87
TRAPPC3-209ENST00000616395 VCPP55072 806 aaKnown RBP20.46■□□□□ 0.87
TRAPPC3-209ENST00000616395 IWS1Q96ST2 819 aa20.46■□□□□ 0.87
TRAPPC3-209ENST00000616395 RMDN3Q96TC7 470 aa20.46■□□□□ 0.87
TRAPPC3-209ENST00000616395 KMT2EQ8IZD2 1858 aa20.45■□□□□ 0.87
TRAPPC3-209ENST00000616395 LOC730098B7Z3J9 87 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 ORC4O43929 436 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 SORBS3O60504 671 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 CTSHP09668 335 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 HOXD8P13378 290 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 ADAM15Q13444 863 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 ATOH1Q92858 354 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 ATP6V0A1Q93050 837 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 EVI5LQ96CN4 794 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 MSLNLQ96KJ4 702 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 ANAPC4Q9UJX5 808 aa20.45■□□□□ 0.86
TRAPPC3-209ENST00000616395 MYO7AQ13402 2215 aa20.44■□□□□ 0.86
TRAPPC3-209ENST00000616395 PPFIA4O75335 1185 aa20.44■□□□□ 0.86
TRAPPC3-209ENST00000616395 EIF3JO75822 258 aaKnown RBP20.44■□□□□ 0.86
TRAPPC3-209ENST00000616395 NDUFV1P49821 464 aa20.44■□□□□ 0.86
TRAPPC3-209ENST00000616395 RILPL2Q969X0 211 aa20.44■□□□□ 0.86
TRAPPC3-209ENST00000616395 TOMM22Q9NS69 142 aa20.44■□□□□ 0.86
TRAPPC3-209ENST00000616395 A0A0D9SFI3 127 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 C17orf102A2RUQ5 167 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 REC8O95072 547 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 EYA4O95677 639 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 EIF2AK2P19525 551 aaKnown RBP20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 SDSP20132 328 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 HSDL1Q3SXM5 330 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 RRP12Q5JTH9 1297 aaKnown RBP20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 ARHGEF16Q5VV41 709 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 FAM227BQ96M60 508 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 CPVLQ9H3G5 476 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 KIAA1217Q5T5P2 1943 aa20.43■□□□□ 0.86
TRAPPC3-209ENST00000616395 TREHO43280 583 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 FGRP09769 529 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 GOLGA8HP0CJ92 632 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 SNHG28P0DPA3 235 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 GSPT1P15170 499 aaKnown RBP20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 AVPR2P30518 371 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 MFAP1P55081 439 aaKnown RBP20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 SIGLEC14Q08ET2 396 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 SPATA33Q96N06 139 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 C16orf70Q9BSU1 422 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 UBA5Q9GZZ9 404 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 IRF2BPLQ9H1B7 796 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 CLEC1BQ9P126 229 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 RWDD3Q9Y3V2 267 aa20.42■□□□□ 0.86
TRAPPC3-209ENST00000616395 ZDBF2Q9HCK1 2354 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 H0Y858 1186 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 HIP1O00291 1037 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 MMP1P03956 469 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 NR3C2P08235 984 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 NMIQ13287 307 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 CAMK1Q14012 370 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 CBX2Q14781 532 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 VPS53Q5VIR6 699 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 MYSM1Q5VVJ2 828 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 APBB2Q92870 758 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 CLP1Q92989 425 aaKnown RBP20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 ASIC4Q96FT7 647 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 MAF1Q9H063 256 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 TLR9Q9NR96 1032 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 TCP11L1Q9NUJ3 509 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 ABCB11O95342 1321 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 ADGRA3Q8IWK6 1321 aa20.41■□□□□ 0.86
TRAPPC3-209ENST00000616395 CAND2O75155 1236 aa20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 SMIM10L2AP0DMW4 78 aa20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 SMIM10L2BP0DMW5 78 aa20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 HOXC8P31273 242 aa20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 CDC37Q16543 378 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 CELF3Q5SZQ8 465 aaKnown RBP20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 SMRP1Q8NCR6 262 aa20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 RUFY2Q8WXA3 655 aa20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 PXMP2Q9NR77 195 aa20.4■□□□□ 0.86
TRAPPC3-209ENST00000616395 ASCL5Q7RTU5 278 aa20.39■□□□□ 0.85
TRAPPC3-209ENST00000616395 ADGRD2Q7Z7M1 963 aa20.39■□□□□ 0.85
TRAPPC3-209ENST00000616395 MCF2L2Q86YR7 1114 aa20.39■□□□□ 0.85
TRAPPC3-209ENST00000616395 RNPEPQ9H4A4 650 aa20.39■□□□□ 0.85
TRAPPC3-209ENST00000616395 RC3H2Q9HBD1 1191 aaKnown RBP20.39■□□□□ 0.85
TRAPPC3-209ENST00000616395 RGS20O76081 388 aa20.38■□□□□ 0.85
TRAPPC3-209ENST00000616395 GGPS1O95749 300 aa20.38■□□□□ 0.85
TRAPPC3-209ENST00000616395 COASYQ13057 564 aa20.38■□□□□ 0.85
TRAPPC3-209ENST00000616395 ZNF589Q86UQ0 364 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC3-209ENST00000616395 EFHBQ8N7U6 833 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms