RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ACLYP53396 1101 aa15.04■□□□□ -0
MDC1-209ENST00000613547 SP2Q02086 613 aa15.04■□□□□ -0
MDC1-209ENST00000613547 DGKDQ16760 1214 aa15.04■□□□□ -0
MDC1-209ENST00000613547 Q4G0T1 1027 aa15.04■□□□□ -0
MDC1-209ENST00000613547 AFG1LQ8WV93 481 aa15.04■□□□□ -0
MDC1-209ENST00000613547 HTATIP2Q9BUP3 242 aa15.04■□□□□ -0
MDC1-209ENST00000613547 SENP6Q9GZR1 1112 aaPredicted RBP15.04■□□□□ -0
MDC1-209ENST00000613547 AGO4Q9HCK5 861 aaKnown RBP15.04■□□□□ -0
MDC1-209ENST00000613547 JPH1Q9HDC5 661 aaPredicted RBP15.04■□□□□ -0
MDC1-209ENST00000613547 TBC1D22BQ9NU19 505 aa15.04■□□□□ -0
MDC1-209ENST00000613547 CTAGE5O15320 804 aa15.03■□□□□ -0
MDC1-209ENST00000613547 MARCH6O60337 910 aa15.03■□□□□ -0
MDC1-209ENST00000613547 SORBS3O60504 671 aa15.03■□□□□ -0
MDC1-209ENST00000613547 PPFIA4O75335 1185 aa15.03■□□□□ -0
MDC1-209ENST00000613547 MMP3P08254 477 aa15.03■□□□□ -0
MDC1-209ENST00000613547 COL6A1P12109 1028 aa15.03■□□□□ -0
MDC1-209ENST00000613547 TRAPPC10P48553 1259 aa15.03■□□□□ -0
MDC1-209ENST00000613547 EARS2Q5JPH6 523 aaKnown RBP15.03■□□□□ -0
MDC1-209ENST00000613547 CCSAPQ6IQ19 270 aaPredicted RBP15.03■□□□□ -0
MDC1-209ENST00000613547 DIS3LQ8TF46 1054 aaKnown RBP15.03■□□□□ -0
MDC1-209ENST00000613547 VTI1AQ96AJ9 217 aa15.03■□□□□ -0
MDC1-209ENST00000613547 SLC9A2Q9UBY0 812 aa15.03■□□□□ -0
MDC1-209ENST00000613547 ELP1O95163 1332 aa15.02■□□□□ -0
MDC1-209ENST00000613547 A0A1W2PQ45 241 aaPredicted RBP15.02■□□□□ -0
MDC1-209ENST00000613547 A0A1W2PQY0 241 aa15.02■□□□□ -0
MDC1-209ENST00000613547 FAM205CA6NFA0 338 aa15.02■□□□□ -0
MDC1-209ENST00000613547 ATP9AO75110 1047 aa15.02■□□□□ -0
MDC1-209ENST00000613547 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
MDC1-209ENST00000613547 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
MDC1-209ENST00000613547 SP4Q02446 784 aa15.02■□□□□ -0
MDC1-209ENST00000613547 ORC2Q13416 577 aaPredicted RBP15.02■□□□□ -0
MDC1-209ENST00000613547 HSDL1Q3SXM5 330 aa15.02■□□□□ -0
MDC1-209ENST00000613547 CXCL17Q6UXB2 119 aa15.02■□□□□ -0
MDC1-209ENST00000613547 UBE2Q1Q7Z7E8 422 aa15.02■□□□□ -0
MDC1-209ENST00000613547 FERMT2Q96AC1 680 aa15.02■□□□□ -0
MDC1-209ENST00000613547 MBOAT7Q96N66 472 aa15.02■□□□□ -0
MDC1-209ENST00000613547 RIT2Q99578 217 aa15.02■□□□□ -0
MDC1-209ENST00000613547 MTG1Q9BT17 334 aaPredicted RBP15.02■□□□□ -0
MDC1-209ENST00000613547 STARD7Q9NQZ5 370 aa15.02■□□□□ -0
MDC1-209ENST00000613547 KIF28PB7ZC32 967 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 TBX3O15119 743 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 MSH4O15457 936 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 GAS7O60861 476 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 BAG4O95429 457 aaKnown RBP15.01□□□□□ -0.01
MDC1-209ENST00000613547 ATP2B1P20020 1258 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 SYT1P21579 422 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 PURAQ00577 322 aaKnown RBP15.01□□□□□ -0.01
MDC1-209ENST00000613547 ITGB3BPQ13352 177 aaPredicted RBP15.01□□□□□ -0.01
MDC1-209ENST00000613547 LRCH2Q5VUJ6 765 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 BRAPQ7Z569 592 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 SPRYD3Q8NCJ5 442 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 LENG9Q96B70 501 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 FAM20AQ96MK3 541 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 SEZ6LQ9BYH1 1024 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 CENPFP49454 3210 aa15.01□□□□□ -0.01
MDC1-209ENST00000613547 EDIL3O43854 480 aa15□□□□□ -0.01
MDC1-209ENST00000613547 NEMFO60524 1076 aa15□□□□□ -0.01
MDC1-209ENST00000613547 HOXD8P13378 290 aaPredicted RBP15□□□□□ -0.01
MDC1-209ENST00000613547 ANP32AP39687 249 aaKnown RBP15□□□□□ -0.01
MDC1-209ENST00000613547 RGS19P49795 217 aa15□□□□□ -0.01
MDC1-209ENST00000613547 KRT76Q01546 638 aa15□□□□□ -0.01
MDC1-209ENST00000613547 RILPL1Q5EBL4 403 aa15□□□□□ -0.01
MDC1-209ENST00000613547 TTC38Q5R3I4 469 aa15□□□□□ -0.01
MDC1-209ENST00000613547 SLFN12Q8IYM2 578 aa15□□□□□ -0.01
MDC1-209ENST00000613547 SEPT1Q8WYJ6 367 aa15□□□□□ -0.01
MDC1-209ENST00000613547 SLC5A5Q92911 643 aa15□□□□□ -0.01
MDC1-209ENST00000613547 GPR20Q99678 358 aa15□□□□□ -0.01
MDC1-209ENST00000613547 KATNAL1Q9BW62 490 aa15□□□□□ -0.01
MDC1-209ENST00000613547 TEKT3Q9BXF9 490 aa15□□□□□ -0.01
MDC1-209ENST00000613547 ZNF215Q9UL58 517 aaPredicted RBP15□□□□□ -0.01
MDC1-209ENST00000613547 KIAA1217Q5T5P2 1943 aa15□□□□□ -0.01
MDC1-209ENST00000613547 A0A0U1RQG5 324 aaPredicted RBP14.99□□□□□ -0.01
MDC1-209ENST00000613547 DDX39AO00148 427 aaKnown RBP14.99□□□□□ -0.01
MDC1-209ENST00000613547 STX6O43752 255 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 SLC37A4O43826 429 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 MCM7P33993 719 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 TCF7P36402 384 aaPredicted RBP14.99□□□□□ -0.01
MDC1-209ENST00000613547 ATN1P54259 1190 aaPredicted RBP14.99□□□□□ -0.01
MDC1-209ENST00000613547 ACTR2P61160 394 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 ZNF746Q6NUN9 644 aaPredicted RBP14.99□□□□□ -0.01
MDC1-209ENST00000613547 MIS18BP1Q6P0N0 1132 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 SMAP1Q8IYB5 467 aaPredicted RBP14.99□□□□□ -0.01
MDC1-209ENST00000613547 AZI2Q9H6S1 392 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 BCAS3Q9H6U6 928 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 KCNMB3Q9NPA1 279 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 DAXXQ9UER7 740 aaPredicted RBP14.99□□□□□ -0.01
MDC1-209ENST00000613547 FRMPD3Q5JV73 1810 aa14.99□□□□□ -0.01
MDC1-209ENST00000613547 DHX15O43143 795 aaKnown RBP14.98□□□□□ -0.01
MDC1-209ENST00000613547 LGALS2P05162 132 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 ZNF286BP0CG31 522 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 JAK3P52333 1124 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 CHMP4BP1P59074 171 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 CALCRLQ16602 461 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 UTP14CQ5TAP6 766 aaKnown RBP14.98□□□□□ -0.01
MDC1-209ENST00000613547 SLC39A5Q6ZMH5 540 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 ETNPPLQ8TBG4 499 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 UIMC1Q96RL1 719 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 SAMM50Q9Y512 469 aa14.98□□□□□ -0.01
MDC1-209ENST00000613547 MROH7Q68CQ1 1323 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms