RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 EDEM3Q9BZQ6 932 aa8.22□□□□□ -1.09
PPARGC1A-217ENST00000613098 BCAS3Q9H6U6 928 aa8.22□□□□□ -1.09
PPARGC1A-217ENST00000613098 SRP68Q9UHB9 627 aaKnown RBP8.22□□□□□ -1.09
PPARGC1A-217ENST00000613098 ATXN2Q99700 1313 aaKnown RBP8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 ARFGEF1Q9Y6D6 1849 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 PPP1R2P41236 205 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 RHBDL3P58872 404 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 COASYQ13057 564 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 BYSLQ13895 437 aaKnown RBP8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 NFIXQ14938 502 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 SWT1Q5T5J6 900 aaKnown RBP8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 IQCEQ6IPM2 695 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 C8orf74Q6P047 294 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 CCDC84Q86UT8 332 aaPredicted RBP8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 MAPKAPK5Q8IW41 473 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 C1orf131Q8NDD1 294 aaKnown RBP8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 NEDD1Q8NHV4 660 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 SCFD2Q8WU76 684 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 COA7Q96BR5 231 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 AIPL1Q9NZN9 384 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 CEP72Q9P209 647 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 STK17AQ9UEE5 414 aa8.21□□□□□ -1.09
PPARGC1A-217ENST00000613098 NPHP3-ACAD11A0A0J9YXS1 232 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 MYO1FO00160 1098 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 PDHBP11177 359 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 HSPA9P38646 679 aaKnown RBP8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 PDIA5Q14554 519 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 SLC18A3Q16572 532 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 ARSHQ5FYA8 562 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 NAA35Q5VZE5 725 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 MMS22LQ6ZRQ5 1243 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 RBM46Q8TBY0 533 aaKnown RBP8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 SCFD1Q8WVM8 642 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 TBC1D5Q92609 795 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 NOX5Q96PH1 765 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 SLC12A6Q9UHW9 1150 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 ATP6V0A2Q9Y487 856 aa8.21□□□□□ -1.1
PPARGC1A-217ENST00000613098 EBAG9O00559 213 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 IPO7O95373 1038 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 SNHG28P0DPA3 235 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 SMARCA1P28370 1054 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 GUCY2FP51841 1108 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 CASP5P51878 434 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 NAP1L1P55209 391 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 GOLGA6L1Q8N7Z2 621 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 USP38Q8NB14 1042 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 KRT12Q99456 494 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 P2RX7Q99572 595 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 EPN3Q9H201 632 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 MKNK2Q9HBH9 465 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 OPA1O60313 960 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 ERLIN2O94905 339 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 SERPING1P05155 500 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 ACTN1P12814 892 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 POLD1P28340 1107 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 RNASE9P60153 205 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 POLR2FP61218 127 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 AMPD3Q01432 767 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 CALCRLQ16602 461 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 PTGISQ16647 500 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 CFAP221Q4G0U5 840 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 HYIQ5T013 277 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 ARHGAP27Q6ZUM4 889 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 ZNF571Q7Z3V5 609 aaPredicted RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 CLEC10AQ8IUN9 316 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 OR2W6PQ8NHA6 318 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 NGLY1Q96IV0 654 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 EYA3Q99504 573 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 LZTS2Q9BRK4 669 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 VAT1LQ9HCJ6 419 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 CNOT8Q9UFF9 292 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 ADAMTS1Q9UHI8 967 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 COL4A3BPQ9Y5P4 624 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 IGKV6D-41A0A0C4DH26 115 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 FRMD3A2A2Y4 597 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 DCDC2CA8MYV0 355 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 CLSTN1O94985 981 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 FSBPO95073 299 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 GSCP56915 257 aaPredicted RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 POU5F1Q01860 360 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 ORC2Q13416 577 aaPredicted RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 DDX42Q86XP3 938 aaKnown RBP eCLIP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 DZIP1Q86YF9 867 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 REXO1Q8N1G1 1221 aaKnown RBP8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 MYCBPAPQ8TBZ2 947 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 ALS2CR12Q96Q35 445 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 YY1AP1Q9H869 796 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 TMBIM4Q9HC24 238 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 C6orf50Q9HD87 102 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 STXBP5LQ9Y2K9 1186 aa8.2□□□□□ -1.1
PPARGC1A-217ENST00000613098 FRMPD2Q68DX3 1309 aaPredicted RBP8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 BTNL10A8MVZ5 291 aa8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 GNA11P29992 359 aa8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 NT5C2P49902 561 aa8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 HDLBPQ00341 1268 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 CACNB1Q02641 598 aaPredicted RBP8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 PTK2Q05397 1052 aa8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 DDB1Q16531 1140 aa8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 QPCTQ16769 361 aa8.19□□□□□ -1.1
PPARGC1A-217ENST00000613098 PROM2Q8N271 834 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms