RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 FAM227BQ96M60 508 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ARIH1Q9Y4X5 557 aaPredicted RBP11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 MAGI2Q86UL8 1455 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 SBNO2Q9Y2G9 1366 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 GGCXP38435 758 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 KRT76Q01546 638 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TRAF1Q13077 416 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 KRBA2Q6ZNG9 492 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 SCG3Q8WXD2 468 aaKnown RBP11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TNNI1P19237 187 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ART3Q13508 389 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 MFSD6Q6ZSS7 791 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PPP1R16BQ96T49 567 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PAXBP1Q9Y5B6 917 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PPIP5K1Q6PFW1 1433 aa11.68□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TRIM67Q6ZTA4 783 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 KRT73Q86Y46 540 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ELMOD1Q8N336 334 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TMEM245Q9H330 911 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PER3P56645 1201 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PPP4R3CPQ6ZMV5 832 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 GPT2Q8TD30 523 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TMEM191CA6NGB0 347 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 DNAJC6O75061 913 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TMEM191BP0C7N4 346 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 METTL21CQ5VZV1 264 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 STAG1Q8WVM7 1258 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 SYKP43405 635 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 BTN3A2P78410 334 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 LRRC8BQ6P9F7 803 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TBC1D1Q86TI0 1168 aaPredicted RBP11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 HMG20BQ9P0W2 317 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 A0A1B0GVL5 298 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 MYO1CO00159 1063 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 FOXR1Q6PIV2 292 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 CSGALNACT2Q8N6G5 542 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 USP19O94966 1318 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 MAGI3Q5TCQ9 1506 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ARHGEF12Q9NZN5 1544 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 GRM8O00222 908 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 RGS5O15539 181 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 KRT1P04264 644 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 SPAG1Q07617 926 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PHKG1Q16816 387 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ARSHQ5FYA8 562 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 LDHAL6AQ6ZMR3 332 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 IFNKQ9P0W0 207 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 KCNG1Q9UIX4 513 aa11.67□□□□□ -0.54
CNTNAP3B-211ENST00000612828 MCF2P10911 925 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 UBA1P22314 1058 aaKnown RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ABL2P42684 1182 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ANKLE2Q86XL3 938 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 NCOA5Q9HCD5 579 aaKnown RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 GPCPD1Q9NPB8 672 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 MAP3K19Q56UN5 1328 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 RNF40O75150 1001 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 NCF2P19878 526 aaPredicted RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 IPO5O00410 1097 aaKnown RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 RASGRF2O14827 1237 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 SHQ1Q6PI26 577 aaKnown RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TRIM63Q969Q1 353 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 IARS2Q9NSE4 1012 aaKnown RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 RBMXL2O75526 392 aaKnown RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 IFNA14P01570 189 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 DARSP14868 501 aaKnown RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 AP1S2P56377 157 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 HDAC4P56524 1084 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 SNX30Q5VWJ9 437 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 CROCCP2Q86T23 111 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 CCDC162PA2VCL2 907 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ASMTLO95671 621 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 LPIN1Q14693 890 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 IRAK1BP1Q5VVH5 260 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 NUGGCQ68CJ6 796 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 RNF19BQ6ZMZ0 732 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TFCP2L1Q9NZI6 479 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 FAN1Q9Y2M0 1017 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 NPC1L1Q9UHC9 1359 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 KDM1AO60341 852 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 CUL1Q13616 776 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 GLG1Q92896 1179 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 RPRD1AQ96P16 312 aaPredicted RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TLK1Q9UKI8 766 aa11.66□□□□□ -0.54
CNTNAP3B-211ENST00000612828 CHL1O00533 1208 aa11.65□□□□□ -0.54
CNTNAP3B-211ENST00000612828 ERN1O75460 977 aaKnown RBP11.65□□□□□ -0.54
CNTNAP3B-211ENST00000612828 RPS6KA3P51812 740 aa11.65□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TFCP2Q12800 502 aa11.65□□□□□ -0.54
CNTNAP3B-211ENST00000612828 EDC3Q96F86 508 aaKnown RBP11.65□□□□□ -0.54
CNTNAP3B-211ENST00000612828 COQ6Q9Y2Z9 468 aa11.65□□□□□ -0.54
CNTNAP3B-211ENST00000612828 CCDC171Q6TFL3 1326 aa11.65□□□□□ -0.54
CNTNAP3B-211ENST00000612828 GOLGA8TH3BQL2 631 aa11.65□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TBX3O15119 743 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms