RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SALL4Q9UJQ4 1053 aa15.62■□□□□ 0.09
PCDHGA3-202ENST00000612467 MYO3BQ8WXR4 1341 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 ZBTB39O15060 712 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 KRT18P05783 430 aaKnown RBP15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 GFPT1Q06210 699 aaPredicted RBP15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 CCDC40Q4G0X9 1142 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 TATDN1Q6P1N9 297 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 TRAPPC11Q7Z392 1133 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 SCFD1Q8WVM8 642 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 NYAP2Q9P242 653 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 SFI1A8K8P3 1242 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 H3BQF6 201 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 RAD17O75943 681 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 MOCS3O95396 460 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 OAS2P29728 719 aaKnown RBP15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 CYLC1P35663 651 aaPredicted RBP15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 ZCWPW2Q504Y3 356 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 GSPT2Q8IYD1 628 aaKnown RBP15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 LENG9Q96B70 501 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 IDI2Q9BXS1 227 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 RGL1Q9NZL6 768 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 PCDHA2Q9Y5H9 948 aa15.61■□□□□ 0.09
PCDHGA3-202ENST00000612467 CXCR5P32302 372 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 SPIRE1Q08AE8 756 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 MKL1Q969V6 931 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 NUP58Q9BVL2 599 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 EIF3CLB5ME19 914 aaKnown RBP15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 PSMD14O00487 310 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 NCK2O43639 380 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 N4BP1O75113 896 aaKnown RBP15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 KIF11P52732 1056 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 GABPB1Q06547 395 aaPredicted RBP15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 KCTD19Q17RG1 926 aaPredicted RBP15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 CCDC174Q6PII3 467 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 FBXO11Q86XK2 927 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 ETNPPLQ8TBG4 499 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 BAP1Q92560 729 aa15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 EIF3CQ99613 913 aaKnown RBP15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 DHX36Q9H2U1 1008 aaKnown RBP15.6■□□□□ 0.09
PCDHGA3-202ENST00000612467 EML1O00423 815 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 CHMP2AO43633 222 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 SPATA31C1P0DKV0 1188 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 DNA2P51530 1060 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 KRT83P78385 493 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 KCNA1Q09470 495 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 SMC1AQ14683 1233 aaKnown RBP15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 COBLL1Q53SF7 1204 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 BEND6Q5SZJ8 279 aaPredicted RBP15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 UTP14CQ5TAP6 766 aaKnown RBP15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 SYDE2Q5VT97 1194 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 TMEM179Q6ZVK1 233 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 MIGA2Q7L4E1 593 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 DCAF4Q8WV16 495 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 AMNQ9BXJ7 453 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 DEF6Q9H4E7 631 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 JADE2Q9NQC1 790 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 PLAGL2Q9UPG8 496 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 PPIP5K2O43314 1243 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 BUB1O43683 1085 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 SLC12A3P55017 1021 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 LRRC63Q05C16 580 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 IFIH1Q9BYX4 1025 aaKnown RBP15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 PCDHA13Q9Y5I0 950 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 SAR1BQ9Y6B6 198 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 MSH4O15457 936 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 KRT86O43790 486 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 AKR1B10O60218 316 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 NOL4O94818 638 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 PRPF6O94906 941 aaKnown RBP15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 BMP3P12645 472 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 ACTN1P12814 892 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 C2orf54Q08AI8 447 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 WHAMMP3Q1A5X7 153 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 CACNA2D4Q7Z3S7 1137 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 RETREG2Q8NC44 543 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 PIGOQ8TEQ8 1089 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 CRYGNQ8WXF5 182 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 TSG101Q99816 390 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 LSM14BQ9BX40 385 aaKnown RBP15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 GLIS2Q9BZE0 524 aaPredicted RBP15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 MYO1AQ9UBC5 1043 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 PRR12Q9ULL5 1215 aa15.59■□□□□ 0.09
PCDHGA3-202ENST00000612467 SPDYE3A6NKU9 549 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 TLR2O60603 784 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 IPO7O95373 1038 aaKnown RBP15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 CFBP00751 764 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 MYBP10242 640 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 GCFC2P16383 781 aaKnown RBP15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 VAV2P52735 878 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 POLR2FP61218 127 aaKnown RBP15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 TDRD12Q587J7 1177 aaKnown RBP15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 SFR1Q86XK3 245 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 KSR1Q8IVT5 923 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 MSANTD4Q8NCY6 345 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 COG1Q8WTW3 980 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 REEP2Q9BRK0 252 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.08
PCDHGA3-202ENST00000612467 CCDC151A5D8V7 595 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms