RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 NEK11Q8NG66 645 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 EEF2KMTQ96G04 330 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 POLR3CQ9BUI4 534 aaPredicted RBP11.56□□□□□ -0.56
PABPC1-224ENST00000610907 TDRD3Q9H7E2 651 aaKnown RBP11.56□□□□□ -0.56
PABPC1-224ENST00000610907 MMRN2Q9H8L6 949 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
PABPC1-224ENST00000610907 PUF60Q9UHX1 559 aaKnown RBP11.56□□□□□ -0.56
PABPC1-224ENST00000610907 FAM196BA6NMK8 535 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 PLA2G6O60733 806 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 TBC1D8O95759 1140 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 GH2P01242 217 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 SSBP05455 408 aaKnown RBP eCLIP11.55□□□□□ -0.56
PABPC1-224ENST00000610907 PRLRP16471 622 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 IKQ13123 557 aaPredicted RBP11.55□□□□□ -0.56
PABPC1-224ENST00000610907 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
PABPC1-224ENST00000610907 TERF2Q15554 542 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 AOC3Q16853 763 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 CCDC40Q4G0X9 1142 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 TRIM58Q8NG06 486 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 UBXN6Q9BZV1 441 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 ZMYND15Q9H091 742 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 ANKZF1Q9H8Y5 726 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 CEP72Q9P209 647 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 PCDHAC2Q9Y5I4 1007 aa11.55□□□□□ -0.56
PABPC1-224ENST00000610907 POTEB3A0JP26 581 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 POTECB2RU33 542 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 CETN3O15182 167 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 PJA2O43164 708 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 MED24O75448 989 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 KRT18P05783 430 aaKnown RBP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 MUTP22033 750 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 LRRC41Q15345 812 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 PRR16Q569H4 304 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 FKBP1CQ5VVH2 108 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 MSL1Q68DK7 614 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 IQCEQ6IPM2 695 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 WDR93Q6P2C0 686 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 PDXDC1Q6P996 788 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 POTEBQ6S5H4 581 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 CACNA2D4Q7Z3S7 1137 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 CATSPER3Q86XQ3 398 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 TRIM59Q8IWR1 403 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 FAM151AQ8WW52 585 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 BAP1Q92560 729 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 SECISBP2LQ93073 1101 aaKnown RBP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 LENG9Q96B70 501 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 PRMT6Q96LA8 375 aaPredicted RBP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 VPS33BQ9H267 617 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 KCTD10Q9H3F6 313 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 LUC7LQ9NQ29 371 aaKnown RBP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 FAM207AQ9NSI2 230 aaPredicted RBP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 ARHGAP20Q9P2F6 1191 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 TRAF3IP3Q9Y228 551 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 TMX2Q9Y320 296 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 JRKLQ9Y4A0 524 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 MAP2K7O14733 419 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 PPIP5K2O43314 1243 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 TACC1O75410 805 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 GDF11O95390 407 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 STAT2P52630 851 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 KIF11P52732 1056 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 GIT2Q14161 759 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 LONRF2Q1L5Z9 754 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 ARSHQ5FYA8 562 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 RRAGAQ7L523 313 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 FRMD5Q7Z6J6 570 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 RTKN2Q8IZC4 609 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 RNF10Q8N5U6 811 aaKnown RBP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 CHURC1Q8WUH1 139 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 SCFD1Q8WVM8 642 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 FUT8Q9BYC5 575 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 IFIH1Q9BYX4 1025 aaKnown RBP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 TANGO6Q9C0B7 1094 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 LACRTQ9GZZ8 138 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 EPC1Q9H2F5 836 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 DEF6Q9H4E7 631 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 ZSWIM4Q9H7M6 989 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 EHMT1Q9H9B1 1298 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 GOPCQ9HD26 462 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 PRDM10Q9NQV6 1147 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 TRIM10Q9UDY6 481 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 PRR12Q9ULL5 1215 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 PCDHA13Q9Y5I0 950 aa11.54□□□□□ -0.56
PABPC1-224ENST00000610907 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.54□□□□□ -0.56
PABPC1-224ENST00000610907 TARSL2A2RTX5 802 aaKnown RBP11.53□□□□□ -0.56
PABPC1-224ENST00000610907 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 RBAK-RBAKDNI3L0D1 243 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 PDXKO00764 312 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 MSH4O15457 936 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 AKR1B10O60218 316 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 TBC1D12O60347 775 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 EYA4O95677 639 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 SPATA31C1P0DKV0 1188 aa11.53□□□□□ -0.56
PABPC1-224ENST00000610907 GAP43P17677 238 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms