RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	PRR12	Q9ULL5	1215 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	ZHX2	Q9Y6X8	837 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	ZNF541	Q9H0D2	1346 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	CNTNAP1	P78357	1384 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	COL4A5	P29400	1685 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	ABL1	P00519	1130 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	RPN1	P04843	607 aa	Known RBP	10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	FAM182A	Q5T1J6	154 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	FKBP1C	Q5VVH2	108 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	ARMCX5	Q6P1M9	558 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	KRT26	Q7Z3Y9	468 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	NOC4L	Q9BVI4	516 aa	Known RBP	10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	BHMT2	Q9H2M3	363 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	RIC8A	Q9NPQ8	531 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	JADE2	Q9NQC1	790 aa		10.9	□□□□□ -0.66
CTCFL-222	ENST00000609232	CDK5RAP2	Q96SN8	1893 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	PRPF6	O94906	941 aa	Known RBP	10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GPR162	Q16538	588 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	IL17A	Q16552	155 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	CCDC127	Q96BQ5	260 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	RNF181	Q9P0P0	153 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	RSPH14	Q9UHP6	348 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	DACH1	Q9UI36	760 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	ESYT2	A0FGR8	921 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GOLGA8IP	A6NC78	632 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GOLGA8J	A6NMD2	632 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	CCDC169	A6NNP5	214 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	BUB1	O43683	1085 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	ACTN4	O43707	911 aa	Known RBP	10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	SRGAP2	O75044	1071 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	MARK3	P27448	753 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	HMGCS2	P54868	508 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	PRPF4B	Q13523	1007 aa	Known RBP	10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	TMCO3	Q6UWJ1	677 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	RAB34	Q9BZG1	259 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GOLPH3	Q9H4A6	298 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	TMX2	Q9Y320	296 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	CLGN	O14967	610 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GTF2A1	P52655	376 aa	Predicted RBP	10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	KCNK18	Q7Z418	384 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GPBP1	Q86WP2	473 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	CDR2L	Q86X02	465 aa	Predicted RBP	10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GMCL1P1	Q8NEA9	526 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	NEK11	Q8NG66	645 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GMCL1	Q96IK5	515 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	PICK1	Q9NRD5	415 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	GGA3	Q9NZ52	723 aa		10.89	□□□□□ -0.67
CTCFL-222	ENST00000609232	MYO7A	Q13402	2215 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	AKR1B10	O60218	316 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	CSDE1	O75534	798 aa	Known RBP	10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	GCNT3	O95395	438 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	LMNB1	P20700	586 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	NOP2	P46087	812 aa	Known RBP	10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	PSMC6	P62333	389 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	PAK1	Q13153	545 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	ARHGAP44	Q17R89	818 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	SV2B	Q7L1I2	683 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	MTMR14	Q8NCE2	650 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	WRNIP1	Q96S55	665 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	PYM1	Q9BRP8	204 aa	Known RBP	10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	VCPKMT	Q9H867	229 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	HYOU1	Q9Y4L1	999 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	ABCB11	O95342	1321 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	MYH8	P13535	1937 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	TMEM110-MUSTN1	A8MSY1	372 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	RSPH10B2	B2RC85	870 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	PSMA7	O14818	248 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	DDN	O94850	711 aa	Predicted RBP	10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	RSPH10B	P0C881	870 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	GJC1	P36383	396 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	SSR1	P43307	286 aa	Known RBP	10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	TTC16	Q8NEE8	873 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	UBXN4	Q92575	508 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	CHP1	Q99653	195 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	SGIP1	Q9BQI5	828 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	ANO3	Q9BYT9	981 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	CCPG1	Q9ULG6	757 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	FAM237A	A0A1B0GTK4	181 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232		M0R2N6	131 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	PRELP	P51888	382 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	SET	Q01105	290 aa	Predicted RBP	10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	MORC3	Q14149	939 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	DNAJC21	Q5F1R6	531 aa	Known RBP	10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	DCAF15	Q66K64	600 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	MYCT1	Q8N699	235 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	GLT8D2	Q9H1C3	349 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	SMARCAL1	Q9NZC9	954 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	TUBE1	Q9UJT0	475 aa		10.88	□□□□□ -0.67
CTCFL-222	ENST00000609232	ECM29	Q5VYK3	1845 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	LAD1	O00515	517 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232		Q3C1V9	767 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	KIAA1755	Q5JYT7	1200 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	TRPM4	Q8TD43	1214 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	MYH15	Q9Y2K3	1946 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	KCNJ18	B7U540	433 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	CSPG5	O95196	566 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	OSTN	P61366	133 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	IGBP1	P78318	339 aa		10.87	□□□□□ -0.67
CTCFL-222	ENST00000609232	MTMR2	Q13614	643 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms