RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 SHHQ15465 462 aa16.38■□□□□ 0.21
PRDM16-210ENST00000607632 C9orf50Q5SZB4 431 aa16.38■□□□□ 0.21
PRDM16-210ENST00000607632 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
PRDM16-210ENST00000607632 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
PRDM16-210ENST00000607632 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
PRDM16-210ENST00000607632 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
PRDM16-210ENST00000607632 WNT8AQ9H1J5 351 aa16.38■□□□□ 0.21
PRDM16-210ENST00000607632 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
PRDM16-210ENST00000607632 UMODL1Q5DID0 1318 aa16.38■□□□□ 0.21
PRDM16-210ENST00000607632 M0R2N6 131 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 MEIS1O00470 390 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 PITPNM1O00562 1244 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 CPLX1O14810 134 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 LGALS2P05162 132 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 ZNF286BP0CG31 522 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 ARHGAP4P98171 946 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 PPIGQ13427 754 aaKnown RBP eCLIP16.37■□□□□ 0.21
PRDM16-210ENST00000607632 MFSD10Q14728 455 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 NPY5RQ15761 445 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 CEP55Q53EZ4 464 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
PRDM16-210ENST00000607632 C16orf59Q7L2K0 433 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 REXO1Q8N1G1 1221 aaKnown RBP16.37■□□□□ 0.21
PRDM16-210ENST00000607632 TMEM199Q8N511 208 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 BICD2Q8TD16 824 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 VWCEQ96DN2 955 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 PPP1R12CQ9BZL4 782 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 VPS54Q9P1Q0 977 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 TELO2Q9Y4R8 837 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 NFASCO94856 1347 aa16.37■□□□□ 0.21
PRDM16-210ENST00000607632 IGLV3-22A0A075B6J6 115 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 EDIL3O43854 480 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 CTDNEP1O95476 244 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 CSF2RAP15509 400 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 CIITAP33076 1130 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 CYP2C18P33260 490 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 STK3Q13188 491 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 KIAA0753Q2KHM9 967 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 FAM47CQ5HY64 1035 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 RASIP1Q5U651 963 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 DAGLBQ8NCG7 672 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 CYP2W1Q8TAV3 490 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 KIF2CQ99661 725 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 SLKQ9H2G2 1235 aaPredicted RBP16.36■□□□□ 0.21
PRDM16-210ENST00000607632 KCNH7Q9NS40 1196 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 HDAC6Q9UBN7 1215 aa16.36■□□□□ 0.21
PRDM16-210ENST00000607632 FAM86B1E9PN63 330 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 H3BRB1 525 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 NOP56O00567 594 aaKnown RBP16.35■□□□□ 0.21
PRDM16-210ENST00000607632 SORBS3O60504 671 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 CDKL5O76039 1030 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 FAM86B2P0C5J1 330 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 CYP2C9P11712 490 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 RBM25P49756 843 aaKnown RBP16.35■□□□□ 0.21
PRDM16-210ENST00000607632 ME3Q16798 604 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 TMEM240Q5SV17 173 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 PPP1R13LQ8WUF5 828 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 LRCH3Q96II8 777 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.35■□□□□ 0.21
PRDM16-210ENST00000607632 TUT1Q9H6E5 874 aaKnown RBP16.35■□□□□ 0.21
PRDM16-210ENST00000607632 IL23AQ9NPF7 189 aa16.35■□□□□ 0.21
PRDM16-210ENST00000607632 GSTTP1A0A1W2PQM5 241 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 LARGE1O95461 756 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 ARP10275 920 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 NEK4P51957 841 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
PRDM16-210ENST00000607632 HIC1Q14526 733 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 PTGISQ16647 500 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 GALNT17Q6IS24 598 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 C7orf31Q8N865 590 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 CAGE1Q8TC20 777 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 SEPT1Q8WYJ6 367 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 DHX38Q92620 1227 aaKnown RBP16.34■□□□□ 0.21
PRDM16-210ENST00000607632 GTF3C6Q969F1 213 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 AGO4Q9HCK5 861 aaKnown RBP16.34■□□□□ 0.21
PRDM16-210ENST00000607632 PCDHA4Q9UN74 947 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 TRIP12Q14669 1992 aaPredicted RBP16.34■□□□□ 0.21
PRDM16-210ENST00000607632 EMSYQ7Z589 1322 aa16.34■□□□□ 0.21
PRDM16-210ENST00000607632 SCN5AQ14524 2016 aa16.33■□□□□ 0.21
PRDM16-210ENST00000607632 LGR5O75473 907 aa16.33■□□□□ 0.2
PRDM16-210ENST00000607632 ATG7O95352 703 aa16.33■□□□□ 0.2
PRDM16-210ENST00000607632 ADAM17P78536 824 aa16.33■□□□□ 0.2
PRDM16-210ENST00000607632 PTK7Q13308 1070 aa16.33■□□□□ 0.2
PRDM16-210ENST00000607632 TRIM71Q2Q1W2 868 aaKnown RBP16.33■□□□□ 0.2
PRDM16-210ENST00000607632 PSRC1Q6PGN9 363 aaPredicted RBP16.33■□□□□ 0.2
PRDM16-210ENST00000607632 RASGRP4Q8TDF6 673 aa16.33■□□□□ 0.2
PRDM16-210ENST00000607632 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
PRDM16-210ENST00000607632 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
PRDM16-210ENST00000607632 LAMA2P24043 3122 aaKnown RBP16.32■□□□□ 0.2
PRDM16-210ENST00000607632 DHX15O43143 795 aaKnown RBP16.32■□□□□ 0.2
PRDM16-210ENST00000607632 PFKMP08237 780 aa16.32■□□□□ 0.2
PRDM16-210ENST00000607632 IQCF3P0C7M6 154 aa16.32■□□□□ 0.2
PRDM16-210ENST00000607632 FDPSP14324 419 aaKnown RBP16.32■□□□□ 0.2
PRDM16-210ENST00000607632 RFC2P35250 354 aa16.32■□□□□ 0.2
PRDM16-210ENST00000607632 TCF7P36402 384 aaPredicted RBP16.32■□□□□ 0.2
PRDM16-210ENST00000607632 CCL23P55773 120 aa16.32■□□□□ 0.2
PRDM16-210ENST00000607632 NLRP5P59047 1200 aa16.32■□□□□ 0.2
PRDM16-210ENST00000607632 SETQ01105 290 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms