RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 DHX32Q7L7V1 743 aaKnown RBP15.35■□□□□ 0.05
CTSA-213ENST00000606782 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 PSTPIP2Q9H939 334 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 UPF2Q9HAU5 1272 aaKnown RBP15.35■□□□□ 0.05
CTSA-213ENST00000606782 ZSWIM6Q9HCJ5 1215 aa15.35■□□□□ 0.05
CTSA-213ENST00000606782 H3BRB1 525 aa15.34■□□□□ 0.05
CTSA-213ENST00000606782 RXRAP19793 462 aa15.34■□□□□ 0.05
CTSA-213ENST00000606782 FUT2Q10981 343 aa15.34■□□□□ 0.05
CTSA-213ENST00000606782 ADGRE1Q14246 886 aa15.34■□□□□ 0.05
CTSA-213ENST00000606782 APOA5Q6Q788 366 aa15.34■□□□□ 0.05
CTSA-213ENST00000606782 SERINC5Q86VE9 423 aa15.34■□□□□ 0.05
CTSA-213ENST00000606782 CMTR1Q8N1G2 835 aaKnown RBP15.34■□□□□ 0.05
CTSA-213ENST00000606782 JAKMIP1Q96N16 626 aaKnown RBP15.34■□□□□ 0.05
CTSA-213ENST00000606782 TBC1D32Q96NH3 1257 aa15.34■□□□□ 0.05
CTSA-213ENST00000606782 GAS2L1Q99501 681 aaPredicted RBP15.34■□□□□ 0.05
CTSA-213ENST00000606782 LRRC2Q9BYS8 371 aa15.34■□□□□ 0.05
CTSA-213ENST00000606782 FTOQ9C0B1 505 aaKnown RBP eCLIP15.34■□□□□ 0.05
CTSA-213ENST00000606782 TUT1Q9H6E5 874 aaKnown RBP15.34■□□□□ 0.05
CTSA-213ENST00000606782 NBNO60934 754 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 LGALS2P05162 132 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 MYOGP15173 224 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 RCAN1P53805 252 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 ZNF200P98182 395 aaPredicted RBP15.33■□□□□ 0.04
CTSA-213ENST00000606782 NLRX1Q86UT6 975 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 FBXL16Q8N461 479 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 WNT8BQ93098 351 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 GPRASP2Q96D09 838 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 KIF2CQ99661 725 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 GPR20Q99678 358 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 COL25A1Q9BXS0 654 aaPredicted RBP15.33■□□□□ 0.04
CTSA-213ENST00000606782 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
CTSA-213ENST00000606782 RTEL1Q9NZ71 1219 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 CHD7Q9P2D1 2997 aa15.33■□□□□ 0.04
CTSA-213ENST00000606782 PRUNE2Q8WUY3 3088 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 MAFGO15525 162 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 POU3F3P20264 500 aaPredicted RBP15.32■□□□□ 0.04
CTSA-213ENST00000606782 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 MBTPS1Q14703 1052 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 CNKSR3Q6P9H4 555 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 SYNE3Q6ZMZ3 975 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 RUFY3Q7L099 469 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 CYFIP1Q7L576 1253 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 MICU3Q86XE3 530 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 HERC6Q8IVU3 1022 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 USP38Q8NB14 1042 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 GIMAP8Q8ND71 665 aaPredicted RBP15.32■□□□□ 0.04
CTSA-213ENST00000606782 CDHR1Q96JP9 859 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 BRPF3Q9ULD4 1205 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 UBIAD1Q9Y5Z9 338 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 NCOR1O75376 2440 aa15.32■□□□□ 0.04
CTSA-213ENST00000606782 ABHD14A-ACY1A0A1B0GW23 586 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
CTSA-213ENST00000606782 SORBS3O60504 671 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 CAND2O75155 1236 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 SMIM10L2AP0DMW4 78 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 SMIM10L2BP0DMW5 78 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 CPA1P15085 419 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 ITGB5P18084 799 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 WDR5P61964 334 aaKnown RBP15.31■□□□□ 0.04
CTSA-213ENST00000606782 ADAM17P78536 824 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 ZNF618Q5T7W0 954 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 RAB11FIP4Q86YS3 637 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 RNPEPQ9H4A4 650 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 FAM217BQ9NTX9 383 aaPredicted RBP15.31■□□□□ 0.04
CTSA-213ENST00000606782 CYP46A1Q9Y6A2 500 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 CNTNAP5Q8WYK1 1306 aa15.31■□□□□ 0.04
CTSA-213ENST00000606782 EYSQ5T1H1 3165 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 hCG_1642624A0A1W2PR95 340 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 C17orf102A2RUQ5 167 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 EFCAB14O75071 495 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 ATP9AO75110 1047 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 CA3P07451 260 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 KCNA2P16389 499 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 MKRN4PQ13434 485 aaPredicted RBP15.3■□□□□ 0.04
CTSA-213ENST00000606782 TCTN1Q2MV58 587 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 CCDC82Q8N4S0 544 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 AGXT2Q9BYV1 514 aa15.3■□□□□ 0.04
CTSA-213ENST00000606782 SPDYE3A6NKU9 549 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 hCG_1984214I3L0E3 225 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 ZBTB43O43298 467 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 GNAT1P11488 350 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 KCNJ6P48051 423 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 UBE2SQ16763 222 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 RTN1Q16799 776 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 WWC2Q6AWC2 1192 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 TYW1BQ6NUM6 668 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 PPP1R18Q6NYC8 613 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 ZNF713Q8N859 430 aaPredicted RBP15.29■□□□□ 0.04
CTSA-213ENST00000606782 ATP6V0A1Q93050 837 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 TCEANC2Q96MN5 208 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 RIC8AQ9NPQ8 531 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 JADE2Q9NQC1 790 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 ZNF215Q9UL58 517 aaPredicted RBP15.29■□□□□ 0.04
CTSA-213ENST00000606782 PCDHA6Q9UN73 950 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 TELO2Q9Y4R8 837 aa15.29■□□□□ 0.04
CTSA-213ENST00000606782 PCDHA8Q9Y5H6 950 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms