RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 ARHGAP1Q07960 439 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 FAAP100Q0VG06 881 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 PTGDRQ13258 359 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 UBE2SQ16763 222 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 LY6KQ17RY6 165 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 GNPTABQ3T906 1256 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 FAM47CQ5HY64 1035 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 PPP1R18Q6NYC8 613 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 CCDC62Q6P9F0 684 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 KCNV1Q6PIU1 500 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 USP17L6PQ6QN14 398 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 FAM126BQ8IXS8 530 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 IL31RAQ8NI17 732 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 AFG1LQ8WV93 481 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 GPKOWQ92917 476 aaPredicted RBP eCLIP6.73□□□□□ -1.33
FOCAD-213ENST00000604254 BADQ92934 168 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 TRIM43Q96BQ3 446 aaPredicted RBP6.73□□□□□ -1.33
FOCAD-213ENST00000604254 TOX2Q96NM4 488 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 SEZ6LQ9BYH1 1024 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 PPP1R12CQ9BZL4 782 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 EHMT1Q9H9B1 1298 aa6.73□□□□□ -1.33
FOCAD-213ENST00000604254 hCG_1984214I3L0E3 225 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 SORBS3O60504 671 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 B4GALT4O60513 344 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 STAM2O75886 525 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 GGPS1O95749 300 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 PLA2G5P39877 138 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 CDK7P50613 346 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 ADCY7P51828 1080 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 AKAP17AQ02040 695 aaKnown RBP6.72□□□□□ -1.33
FOCAD-213ENST00000604254 DGKDQ16760 1214 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 DMRTA1Q5VZB9 504 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 PCNX4Q63HM2 1172 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 WWC2Q6AWC2 1192 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 RUFY3Q7L099 469 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 VSIG10LQ86VR7 867 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 DHX37Q8IY37 1157 aaKnown RBP6.72□□□□□ -1.33
FOCAD-213ENST00000604254 ZNF713Q8N859 430 aaPredicted RBP6.72□□□□□ -1.33
FOCAD-213ENST00000604254 SLC43A3Q8NBI5 491 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 PPTC7Q8NI37 304 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 SPATA33Q96N06 139 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 KATNAL1Q9BW62 490 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 HIPK3Q9H422 1215 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 PSTPIP2Q9H939 334 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 DDX41Q9UJV9 622 aaKnown RBP6.72□□□□□ -1.33
FOCAD-213ENST00000604254 TBX21Q9UL17 535 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 CYP46A1Q9Y6A2 500 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 GBF1Q92538 1859 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 SCN5AQ14524 2016 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 GRIN2DO15399 1336 aa6.72□□□□□ -1.33
FOCAD-213ENST00000604254 LAMA2P24043 3122 aaKnown RBP6.72□□□□□ -1.33
FOCAD-213ENST00000604254 EYSQ5T1H1 3165 aa6.71□□□□□ -1.33
FOCAD-213ENST00000604254 PRUNE2Q8WUY3 3088 aa6.71□□□□□ -1.33
FOCAD-213ENST00000604254 A6NJR5 290 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 STXBP3O00186 592 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 NOP56O00567 594 aaKnown RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 MEIS2O14770 477 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 FIBPO43427 364 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 EIF5BO60841 1220 aaKnown RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 RGS20O76081 388 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 TIMP1P01033 207 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 CD4P01730 458 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 SUPT20HL2P0C7V6 817 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 ZNF286BP0CG31 522 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 TGFB3P10600 412 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 UBA1P22314 1058 aaKnown RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 ITGB8P26012 769 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 CDC27P30260 824 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 MRPS9P82933 396 aaKnown RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 FUT2Q10981 343 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 PPIGQ13427 754 aaKnown RBP eCLIP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 LAMC2Q13753 1193 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 NBPF20Q3BBV1 942 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 CELF3Q5SZQ8 465 aaKnown RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 MFSD5Q6N075 450 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 XRRA1Q6P2D8 792 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 PADI6Q6TGC4 694 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 NLRX1Q86UT6 975 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 ZNF687Q8N1G0 1237 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 TMEM199Q8N511 208 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 EMID1Q96A84 441 aaPredicted RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 RNPC3Q96LT9 517 aaKnown RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 INPP4AQ96PE3 977 aaPredicted RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 USP26Q9BXU7 913 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 UPF3BQ9BZI7 483 aaKnown RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 ALDH8A1Q9H2A2 487 aaPredicted RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 MLXIPQ9HAP2 919 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 TRMT13Q9NUP7 481 aaKnown RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 BARHL2Q9NY43 387 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 RTEL1Q9NZ71 1219 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 NOD1Q9Y239 953 aa6.71□□□□□ -1.34
FOCAD-213ENST00000604254 V9GY48 417 aaPredicted RBP6.71□□□□□ -1.34
FOCAD-213ENST00000604254 TRIP12Q14669 1992 aaPredicted RBP6.7□□□□□ -1.34
FOCAD-213ENST00000604254 TNFRSF10AO00220 468 aa6.7□□□□□ -1.34
FOCAD-213ENST00000604254 CPLX1O14810 134 aa6.7□□□□□ -1.34
FOCAD-213ENST00000604254 ZMYND10O75800 440 aa6.7□□□□□ -1.34
FOCAD-213ENST00000604254 F2P00734 622 aa6.7□□□□□ -1.34
FOCAD-213ENST00000604254 CYP2C9P11712 490 aa6.7□□□□□ -1.34
FOCAD-213ENST00000604254 SCG2P13521 617 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms