RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 FAM86C1Q9NVL1 165 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SIP14410 1827 aa13.76□□□□□ -0.21
PDLIM1P1-201ENST00000604187 TREHO43280 583 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 GGPS1O95749 300 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 RB1P06400 928 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SMIM10L2AP0DMW4 78 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SMIM10L2BP0DMW5 78 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 BMPR1AP36894 532 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 PKN1Q16512 942 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 CELF3Q5SZQ8 465 aaKnown RBP13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MYSM1Q5VVJ2 828 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 C16orf70Q9BSU1 422 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 C5orf42Q9H799 3197 aa13.75□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ADGRA3Q8IWK6 1321 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 TECTAO75443 2155 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 CAND2O75155 1236 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 RGS20O76081 388 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 LINC00271P0C7V0 271 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MYCLP12524 364 aaPredicted RBP13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 UBA1P22314 1058 aaKnown RBP13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 HOXC8P31273 242 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 NDUFV1P49821 464 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 HAND2P61296 217 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ALX1Q15699 326 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 QRICH1Q2TAL8 776 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 FBXL6Q8N531 539 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 APBB2Q92870 758 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 TTC14Q96N46 770 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MRPL11Q9Y3B7 192 aaKnown RBP13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 RWDD3Q9Y3V2 267 aa13.74□□□□□ -0.21
PDLIM1P1-201ENST00000604187 H3BRB1 525 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 DHX16O60231 1041 aaKnown RBP13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 CFBP00751 764 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 FGAP02671 866 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MMP1P03956 469 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 HSPD1P10809 573 aaKnown RBP13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ZXDAP98168 799 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 C20orf194Q5TEA3 1177 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 TBC1D10CQ8IV04 446 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 PDCD2LQ9BRP1 358 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ZKSCAN3Q9BRR0 538 aa13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 TUT1Q9H6E5 874 aaKnown RBP13.73□□□□□ -0.21
PDLIM1P1-201ENST00000604187 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 LGALS2P05162 132 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MX1P20591 662 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SP2Q02086 613 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ADAM15Q13444 863 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 KCNV1Q6PIU1 500 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 IL31RAQ8NI17 732 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 CLP1Q92989 425 aaKnown RBP13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MSLNLQ96KJ4 702 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 RNPEPQ9H4A4 650 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MLXIPQ9HAP2 919 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 RC3H2Q9HBD1 1191 aaKnown RBP13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ALG13Q9NP73 1137 aaKnown RBP13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SETD4Q9NVD3 440 aa13.72□□□□□ -0.21
PDLIM1P1-201ENST00000604187 LOC730098B7Z3J9 87 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 OPLAHO14841 1288 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 EYA4O95677 639 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 HSD17B4P51659 736 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 FOXK2Q01167 660 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 CAMK1Q14012 370 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 BTG3Q14201 252 aaPredicted RBP13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 MFSD6Q6ZSS7 791 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 SMRP1Q8NCR6 262 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 PNMA1Q8ND90 353 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ATOH1Q92858 354 aaPredicted RBP13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 ZFP91Q96JP5 570 aaPredicted RBP13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 VAT1LQ9HCJ6 419 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 CLEC1BQ9P126 229 aa13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 USP15Q9Y4E8 981 aaPredicted RBP13.71□□□□□ -0.21
PDLIM1P1-201ENST00000604187 NEDD4P46934 1319 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 MYO7AQ13402 2215 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 NOP56O00567 594 aaKnown RBP13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 GHRP10912 638 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 HOXA13P31271 388 aaPredicted RBP13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 RRP1P56182 461 aaKnown RBP13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 SIGLEC14Q08ET2 396 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 CBX2Q14781 532 aaPredicted RBP13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ASPRV1Q53RT3 343 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ADGRD2Q7Z7M1 963 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 VSIG10LQ86VR7 867 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 DGKHQ86XP1 1220 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 TRIM50Q86XT4 487 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 EFHBQ8N7U6 833 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ESR2Q92731 530 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 FAM227BQ96M60 508 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 BCAS3Q9H6U6 928 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 KAT14Q9H8E8 782 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 JMJD4Q9H9V9 463 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 BARX2Q9UMQ3 279 aaPredicted RBP13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 PLAGL2Q9UPG8 496 aa13.7□□□□□ -0.22
PDLIM1P1-201ENST00000604187 WDR87Q6ZQQ6 2873 aa13.69□□□□□ -0.22
PDLIM1P1-201ENST00000604187 ZMYM6O95789 1325 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms