RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 EIF3CLB5ME19 914 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ZBTB39O15060 712 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 SASH1O94885 1247 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ITGBL1O95965 494 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TSPY4P0CV99 314 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TSPY10P0CW01 314 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 PF4V1P10720 104 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 GRK2P25098 689 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 CAP2P40123 477 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 PTPN12Q05209 780 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ADCY1Q08828 1119 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ODF1Q14990 250 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 AKAP4Q5JQC9 854 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 NBPF15Q8N660 670 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 AFAP1L1Q8TED9 768 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 EIF3CQ99613 913 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 YIPF2Q9BWQ6 316 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 OSBPL7Q9BZF2 842 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TNKS2Q9H2K2 1166 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 SLC5A4Q9NY91 659 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 CRYL1Q9Y2S2 319 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 NWD2Q9ULI1 1742 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 PTPRCP08575 1304 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 A2MP01023 1474 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 H7C1W4 665 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 RPS6KA5O75582 802 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 EOMESO95936 686 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 VCAM1P19320 739 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TMOD1P28289 359 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 HLTFQ14527 1009 aaKnown RBP eCLIP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 C1orf53Q5VUE5 145 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 VASH1Q7L8A9 365 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 BPHLQ86WA6 291 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ERC1Q8IUD2 1116 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 PASD1Q8IV76 773 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM186BQ8IYM0 893 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 CEP57L1Q8IYX8 460 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 NAXEQ8NCW5 288 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TNIP3Q96KP6 325 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 UNKQ9C0B0 810 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 NACA2Q9H009 215 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF304Q9HCX3 659 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TRPV5Q9NQA5 729 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 UBP1Q9NZI7 540 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TBC1D7Q9P0N9 293 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 LAMP5Q9UJQ1 280 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 PCDHGB6Q9Y5F9 930 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 EPN1Q9Y6I3 576 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 SETBP1Q9Y6X0 1596 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 RPRD2Q5VT52 1461 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM170AA1A519 330 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 GSG1L2A8MUP6 293 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 J3QL48 77 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 FYB1O15117 783 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ZBTB7BO15156 539 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 RTN2O75298 545 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 CNTFP26441 200 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 HOXA10P31260 410 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 CCNHP51946 323 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 MNAT1P51948 309 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 MRPL12P52815 198 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF280AP59817 542 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 PPP2R3AQ06190 1150 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ZSCAN23Q3MJ62 389 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 INTS6LQ5JSJ4 861 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ITPRIPL1Q6GPH6 555 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 POTEAQ6S8J7 498 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 FASTKD5Q7L8L6 764 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 SLFN12Q8IYM2 578 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TRMT2AQ8IZ69 625 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 PLD6Q8N2A8 252 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 CNTD1Q8N815 330 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 EAF1Q96JC9 268 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 TCEANC2Q96MN5 208 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 UIMC1Q96RL1 719 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 IRX2Q9BZI1 471 aaPredicted RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 KCTD10Q9H3F6 313 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 UNC45AQ9H3U1 944 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 ELAC1Q9H777 363 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 STARD7Q9NQZ5 370 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 PAPOLBQ9NRJ5 636 aaKnown RBP5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 KLHL11Q9NVR0 708 aa5.58□□□□□ -1.52
SPTBN1-206ENST00000602898 MAPK8IP3Q9UPT6 1336 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 TROQ12816 1431 aaPredicted RBP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 NAIPQ13075 1403 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 PRAG1Q86YV5 1406 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 MIA2Q96PC5 1412 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ADGRB2O60241 1585 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ERVH48-1M5A8F1 160 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 KIF2AO00139 706 aaPredicted RBP5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 KRT38O76015 456 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF24P17028 368 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 ID4P47928 161 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 AP3B2Q13367 1082 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 MUM1Q2TAK8 710 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 KAZNQ674X7 775 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 CCDC102BQ68D86 513 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 TCP11Q8WWU5 503 aa5.57□□□□□ -1.52
SPTBN1-206ENST00000602898 TSGA13Q96PP4 275 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms