RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PRR16Q569H4 304 aa15.76■□□□□ 0.11
RNF40-212ENST00000602784 EARS2Q5JPH6 523 aaKnown RBP15.76■□□□□ 0.11
RNF40-212ENST00000602784 CYFIP1Q7L576 1253 aa15.76■□□□□ 0.11
RNF40-212ENST00000602784 NOSTRINQ8IVI9 506 aa15.76■□□□□ 0.11
RNF40-212ENST00000602784 SPATA33Q96N06 139 aa15.76■□□□□ 0.11
RNF40-212ENST00000602784 SENP6Q9GZR1 1112 aaPredicted RBP15.76■□□□□ 0.11
RNF40-212ENST00000602784 A0A1W2PQ45 241 aaPredicted RBP15.75■□□□□ 0.11
RNF40-212ENST00000602784 A0A1W2PQY0 241 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 H3BQV1 296 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 IPO5O00410 1097 aaKnown RBP15.75■□□□□ 0.11
RNF40-212ENST00000602784 MMP3P08254 477 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 PURAQ00577 322 aaKnown RBP15.75■□□□□ 0.11
RNF40-212ENST00000602784 GNL2Q13823 731 aaKnown RBP15.75■□□□□ 0.11
RNF40-212ENST00000602784 HSDL1Q3SXM5 330 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 C1orf53Q5VUE5 145 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 GLT1D1Q96MS3 346 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 SDF4Q9BRK5 362 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 SEZ6LQ9BYH1 1024 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 BCAS3Q9H6U6 928 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 TBC1D22BQ9NU19 505 aa15.75■□□□□ 0.11
RNF40-212ENST00000602784 FAM205CA6NFA0 338 aa15.74■□□□□ 0.11
RNF40-212ENST00000602784 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
RNF40-212ENST00000602784 TRAPPC10P48553 1259 aa15.74■□□□□ 0.11
RNF40-212ENST00000602784 ITGB3BPQ13352 177 aaPredicted RBP15.74■□□□□ 0.11
RNF40-212ENST00000602784 LETM2Q2VYF4 491 aa15.74■□□□□ 0.11
RNF40-212ENST00000602784 CXCL17Q6UXB2 119 aa15.74■□□□□ 0.11
RNF40-212ENST00000602784 RIT2Q99578 217 aa15.74■□□□□ 0.11
RNF40-212ENST00000602784 ZNF577Q9BSK1 485 aa15.74■□□□□ 0.11
RNF40-212ENST00000602784 MTG1Q9BT17 334 aaPredicted RBP15.74■□□□□ 0.11
RNF40-212ENST00000602784 HTATIP2Q9BUP3 242 aa15.74■□□□□ 0.11
RNF40-212ENST00000602784 JPH1Q9HDC5 661 aaPredicted RBP15.74■□□□□ 0.11
RNF40-212ENST00000602784 DDX25Q9UHL0 483 aaKnown RBP15.74■□□□□ 0.11
RNF40-212ENST00000602784 NOP56O00567 594 aaKnown RBP15.73■□□□□ 0.11
RNF40-212ENST00000602784 MSH4O15457 936 aa15.73■□□□□ 0.11
RNF40-212ENST00000602784 DHX15O43143 795 aaKnown RBP15.73■□□□□ 0.11
RNF40-212ENST00000602784 TDP2O95551 362 aa15.73■□□□□ 0.11
RNF40-212ENST00000602784 HSP90AA1P07900 732 aaKnown RBP15.73■□□□□ 0.11
RNF40-212ENST00000602784 ORC2Q13416 577 aaPredicted RBP15.73■□□□□ 0.11
RNF40-212ENST00000602784 SNX17Q15036 470 aa15.73■□□□□ 0.11
RNF40-212ENST00000602784 SLC5A5Q92911 643 aa15.73■□□□□ 0.11
RNF40-212ENST00000602784 FERMT2Q96AC1 680 aa15.73■□□□□ 0.11
RNF40-212ENST00000602784 FAM20AQ96MK3 541 aa15.73■□□□□ 0.11
RNF40-212ENST00000602784 GPR20Q99678 358 aa15.73■□□□□ 0.11
RNF40-212ENST00000602784 SLC9A2Q9UBY0 812 aa15.73■□□□□ 0.11
RNF40-212ENST00000602784 KIF28PB7ZC32 967 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 TBX3O15119 743 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 CCNT1O60563 726 aaKnown RBP15.72■□□□□ 0.11
RNF40-212ENST00000602784 MYL3P08590 195 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 BECN1Q14457 450 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 SLC39A5Q6ZMH5 540 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 SLC43A3Q8NBI5 491 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 ETNPPLQ8TBG4 499 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 SEPT1Q8WYJ6 367 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 KCNMB3Q9NPA1 279 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 STARD7Q9NQZ5 370 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 PKD2L1Q9P0L9 805 aa15.72■□□□□ 0.11
RNF40-212ENST00000602784 A0A0U1RQG5 324 aaPredicted RBP15.71■□□□□ 0.11
RNF40-212ENST00000602784 SLC37A4O43826 429 aa15.71■□□□□ 0.11
RNF40-212ENST00000602784 ATG7O95352 703 aa15.71■□□□□ 0.11
RNF40-212ENST00000602784 F2P00734 622 aa15.71■□□□□ 0.11
RNF40-212ENST00000602784 SYT1P21579 422 aa15.71■□□□□ 0.11
RNF40-212ENST00000602784 CDK7P50613 346 aa15.71■□□□□ 0.11
RNF40-212ENST00000602784 MCTP1Q6DN14 999 aa15.71■□□□□ 0.11
RNF40-212ENST00000602784 ZNF746Q6NUN9 644 aaPredicted RBP15.71■□□□□ 0.11
RNF40-212ENST00000602784 VTI1AQ96AJ9 217 aa15.71■□□□□ 0.11
RNF40-212ENST00000602784 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.11
RNF40-212ENST00000602784 GSTTP1A0A1W2PQM5 241 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 ARVCFO00192 962 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 SORBS3O60504 671 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 PSMD10O75832 226 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 ACTR2P61160 394 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 KRT76Q01546 638 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 MLLT1Q03111 559 aaPredicted RBP15.7■□□□□ 0.1
RNF40-212ENST00000602784 ITGA7Q13683 1181 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 LRRC26Q2I0M4 334 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 LRCH2Q5VUJ6 765 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 BRAPQ7Z569 592 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 SMAP1Q8IYB5 467 aaPredicted RBP15.7■□□□□ 0.1
RNF40-212ENST00000602784 KAT2BQ92831 832 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 C16orf70Q9BSU1 422 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 KATNAL1Q9BW62 490 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 TCEAL9Q9UHQ7 104 aa15.7■□□□□ 0.1
RNF40-212ENST00000602784 MKI67P46013 3256 aaKnown RBP15.7■□□□□ 0.1
RNF40-212ENST00000602784 GRIN2DO15399 1336 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 SCN10AQ9Y5Y9 1956 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 H3BRB1 525 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 HAS3O00219 553 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 GAS7O60861 476 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 LGR5O75473 907 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 BAG4O95429 457 aaKnown RBP15.69■□□□□ 0.1
RNF40-212ENST00000602784 CCNE2O96020 404 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 LGALS2P05162 132 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 TCF7P36402 384 aaPredicted RBP15.69■□□□□ 0.1
RNF40-212ENST00000602784 TOB1P50616 345 aaPredicted RBP15.69■□□□□ 0.1
RNF40-212ENST00000602784 ATN1P54259 1190 aaPredicted RBP15.69■□□□□ 0.1
RNF40-212ENST00000602784 RILPL1Q5EBL4 403 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 NFRKBQ6P4R8 1299 aa15.69■□□□□ 0.1
RNF40-212ENST00000602784 ANKRD33Q7Z3H0 272 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms