RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SLC13A4Q9UKG4 626 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 TLR3O15455 904 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 SLC7A5Q01650 507 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 EMBQ6PCB8 327 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 ZNF408Q9H9D4 720 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PCDHA5Q9Y5H7 936 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 MYH8P13535 1937 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 EIF4A3P38919 411 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 NHEJ1Q9H9Q4 299 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 FTCDO95954 541 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 OCRLQ01968 901 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 SLC39A14Q15043 492 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 HIBCHQ6NVY1 386 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 FBXO38Q6PIJ6 1188 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 CYTH2Q99418 400 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 OLA1Q9NTK5 396 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 ESRRAP11474 423 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 TNFAIP1Q13829 316 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 FAM160B1Q5W0V3 765 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 P2RX5Q93086 422 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 MRFAP1Q9Y605 127 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 XPAP23025 273 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 HDLBPQ00341 1268 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 LLGL1Q15334 1064 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 ANKRD36BP1Q96IX9 119 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 AK8Q96MA6 479 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 KIF9Q9HAQ2 790 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 UBN1Q9NPG3 1134 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 THRAP3Q9Y2W1 955 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 FGAP02671 866 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PCP11498 1178 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 ZC3H15Q8WU90 426 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PCDHA13Q9Y5I0 950 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 H0YIN7 160 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PSMC2P35998 433 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 MAGEA9P43362 315 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PCYT1AP49585 367 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 NBPF9Q3BBW0 867 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 FBXO11Q86XK2 927 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PLA2G4DQ86XP0 818 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 NUDCD3Q8IVD9 361 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 VSTM4Q8IW00 320 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 CALN1Q9BXU9 219 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PLAAQ9Y263 795 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 ATP2B4P23634 1241 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PDIA3P30101 505 aaKnown RBP10.36□□□□□ -0.75
CSMD1-217ENST00000602723 RAP1GDS1P52306 607 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 TADA2BQ86TJ2 420 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 FAM186BQ8IYM0 893 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 PARD3BQ8TEW8 1205 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 NUDCD1Q96RS6 583 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 NFU1Q9UMS0 254 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 GOLGA8SH3BPF8 625 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 KRT10P13645 584 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 SNX25Q9H3E2 840 aa10.36□□□□□ -0.75
CSMD1-217ENST00000602723 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 CCNYQ8ND76 341 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 TTC25Q96NG3 672 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 ING2Q9H160 280 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 PNMA2Q9UL42 364 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 TCOF1Q13428 1488 aaKnown RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 PDHA1P08559 390 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 SRRM1Q8IYB3 904 aaKnown RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 TTC1Q99614 292 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 C19orf44Q9H6X5 657 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 SMYD3Q9H7B4 428 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 PPP6R2O75170 966 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 MYL1P05976 194 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 MMEP08473 750 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 CA4P22748 312 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 ICA1Q05084 483 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 ABCC10Q5T3U5 1492 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 CFAP74Q9C0B2 1584 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 ATP5HO75947 161 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 NOP9Q86U38 636 aaKnown RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 GAS2L3Q86XJ1 694 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 BBS5Q8N3I7 341 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 MRPL47Q9HD33 250 aaKnown RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 INSRP06213 1382 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 IQANK1A0A1B0GTG1 560 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 UBAP1LF5GYI3 381 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 KCNA4P22459 653 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 ANGPTL8Q6UXH0 198 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 A0A0G2JND7 137 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 NPR1P16066 1061 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 BTG4Q9NY30 223 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 ATP7AQ04656 1500 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 SYCE1LA8MT33 242 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 MED7O43513 233 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 CHEK2O96017 543 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 SERPING1P05155 500 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 TFDP1Q14186 410 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 FLOT2Q14254 428 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 DLGAP5Q15398 846 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 ZNF710Q8N1W2 664 aa10.35□□□□□ -0.75
CSMD1-217ENST00000602723 CDCA7Q9BWT1 371 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-217ENST00000602723 LGR6Q9HBX8 967 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms