RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FBF1Q8TES7 1133 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 AENQ8WTP8 325 aaKnown RBP9.65□□□□□ -0.86
COMMD3-215ENST00000602574 FBXW7Q969H0 707 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 NSMCE3Q96MG7 304 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 RHOXF2Q9BQY4 288 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 B3GNT4Q9C0J1 378 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 NSRP1Q9H0G5 558 aaKnown RBP9.65□□□□□ -0.86
COMMD3-215ENST00000602574 VPS33BQ9H267 617 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 EPB41L1Q9H4G0 881 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 ABCF3Q9NUQ8 709 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 PANK4Q9NVE7 773 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 SCAF8Q9UPN6 1271 aaKnown RBP9.65□□□□□ -0.86
COMMD3-215ENST00000602574 TNNQ9UQP3 1299 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 TBC1D30Q9Y2I9 924 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 LRCH1Q9Y2L9 728 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 MROH7Q68CQ1 1323 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 MAGEA13PA6NCF6 341 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 CETN3O15182 167 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 OXSR1O95747 527 aaPredicted RBP9.65□□□□□ -0.87
COMMD3-215ENST00000602574 NQO1P15559 274 aaKnown RBP9.65□□□□□ -0.87
COMMD3-215ENST00000602574 WEE1P30291 646 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 SERPINB6P35237 376 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 TUFMP49411 452 aaKnown RBP9.65□□□□□ -0.87
COMMD3-215ENST00000602574 TMTC4Q5T4D3 741 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 ZCCHC8Q6NZY4 707 aaKnown RBP9.65□□□□□ -0.87
COMMD3-215ENST00000602574 C11orf57Q6ZUT1 292 aaPredicted RBP9.65□□□□□ -0.87
COMMD3-215ENST00000602574 PALB2Q86YC2 1186 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 TRIML2Q8N7C3 387 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 SEC16BQ96JE7 1060 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 TRPC7Q9HCX4 862 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 PIH1D3Q9NQM4 214 aaKnown RBP9.65□□□□□ -0.87
COMMD3-215ENST00000602574 ARHGEF38Q9NXL2 777 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 BTBD7Q9P203 1132 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 SEC63Q9UGP8 760 aaKnown RBP9.65□□□□□ -0.87
COMMD3-215ENST00000602574 ATPIF1Q9UII2 106 aa9.65□□□□□ -0.87
COMMD3-215ENST00000602574 CHD2O14647 1828 aaKnown RBP9.64□□□□□ -0.87
COMMD3-215ENST00000602574 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 A0A088AWK7 358 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 GMNCA6NCL1 334 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 CCT8L1PA6NM43 557 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 ERVV-2B6SEH9 535 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 IFIT3O14879 490 aaKnown RBP9.64□□□□□ -0.87
COMMD3-215ENST00000602574 STAMBPO95630 424 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 PYGMP11217 842 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 TRIM27P14373 513 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 PRKACBP22694 351 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 THOP1P52888 689 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 LACTBP83111 547 aaPredicted RBP9.64□□□□□ -0.87
COMMD3-215ENST00000602574 CYLC2Q14093 348 aaPredicted RBP9.64□□□□□ -0.87
COMMD3-215ENST00000602574 ITIH4Q14624 930 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 CCDC62Q6P9F0 684 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 DGLUCYQ7Z3D6 616 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 TTC6Q86TZ1 520 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 SLF1Q9BQI6 1058 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 CENPKQ9BS16 269 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 CNNM2Q9H8M5 875 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 EPB41L4AQ9HCS5 686 aaPredicted RBP9.64□□□□□ -0.87
COMMD3-215ENST00000602574 LEMD3Q9Y2U8 911 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 NOX1Q9Y5S8 564 aa9.64□□□□□ -0.87
COMMD3-215ENST00000602574 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 RXRAP19793 462 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 ATP11AP98196 1134 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 ITGA9Q13797 1035 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 SAFB2Q14151 953 aaKnown RBP eCLIP9.63□□□□□ -0.87
COMMD3-215ENST00000602574 TTMPQ5BVD1 217 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 PASD1Q8IV76 773 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 CROCCP3Q8IVE0 287 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.63□□□□□ -0.87
COMMD3-215ENST00000602574 FNDC8Q8TC99 324 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 RRP36Q96EU6 259 aaKnown RBP9.63□□□□□ -0.87
COMMD3-215ENST00000602574 GIMAP5Q96F15 307 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 VPS50Q96JG6 964 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 IER2Q9BTL4 223 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 PTTG2Q9NZH5 202 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 LNPEPQ9UIQ6 1025 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 PPLO60437 1756 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 CTAGE9A4FU28 777 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 PSMD14O00487 310 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 TRAPPC3O43617 180 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 TRPA1O75762 1119 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 MYBL1P10243 752 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 CETN2P41208 172 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 SERPINB4P48594 390 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 KCTD2Q14681 263 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 KPNB1Q14974 876 aaKnown RBP9.63□□□□□ -0.87
COMMD3-215ENST00000602574 NR1D2Q14995 579 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 MEX3CQ5U5Q3 659 aaKnown RBP9.63□□□□□ -0.87
COMMD3-215ENST00000602574 TUBA3EQ6PEY2 450 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 TTC23LQ6PF05 361 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 CCNI2Q6ZMN8 369 aaPredicted RBP9.63□□□□□ -0.87
COMMD3-215ENST00000602574 Q6ZNX1 250 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 PTF1AQ7RTS3 328 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 EGLN2Q96KS0 407 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 XPO4Q9C0E2 1151 aaKnown RBP9.63□□□□□ -0.87
COMMD3-215ENST00000602574 HYPKQ9NX55 129 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 MOCS1Q9NZB8 636 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 MTMR6Q9Y217 621 aa9.63□□□□□ -0.87
COMMD3-215ENST00000602574 KIAA0232Q92628 1395 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 JCADQ9P266 1359 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms