RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 IMPDH2P12268 514 aa11.03□□□□□ -0.64
FARP1-235ENST00000601656 MRPS5P82675 430 aaKnown RBP11.03□□□□□ -0.64
FARP1-235ENST00000601656 CAVIN4Q5BKX8 364 aa11.03□□□□□ -0.64
FARP1-235ENST00000601656 Q6ZVU0 165 aa11.03□□□□□ -0.64
FARP1-235ENST00000601656 SPATC1Q76KD6 591 aa11.03□□□□□ -0.64
FARP1-235ENST00000601656 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
FARP1-235ENST00000601656 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
FARP1-235ENST00000601656 LINS1Q8NG48 757 aa11.03□□□□□ -0.64
FARP1-235ENST00000601656 PRDM5Q9NQX1 630 aaPredicted RBP11.03□□□□□ -0.64
FARP1-235ENST00000601656 PFDN2Q9UHV9 154 aa11.03□□□□□ -0.64
FARP1-235ENST00000601656 MCM8Q9UJA3 840 aa11.03□□□□□ -0.64
FARP1-235ENST00000601656 ATP11BQ9Y2G3 1177 aa11.03□□□□□ -0.64
FARP1-235ENST00000601656 FRMPD3Q5JV73 1810 aa11.02□□□□□ -0.64
FARP1-235ENST00000601656 CTNND1O60716 968 aaKnown RBP11.02□□□□□ -0.65
FARP1-235ENST00000601656 ZKSCAN1P17029 563 aaPredicted RBP11.02□□□□□ -0.65
FARP1-235ENST00000601656 MCM4P33991 863 aa11.02□□□□□ -0.65
FARP1-235ENST00000601656 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.65
FARP1-235ENST00000601656 OS9Q13438 667 aaPredicted RBP11.02□□□□□ -0.65
FARP1-235ENST00000601656 TTF1Q15361 905 aaPredicted RBP11.02□□□□□ -0.65
FARP1-235ENST00000601656 C4orf17Q53FE4 359 aa11.02□□□□□ -0.65
FARP1-235ENST00000601656 DIEXFQ68CQ4 756 aaKnown RBP11.02□□□□□ -0.65
FARP1-235ENST00000601656 CRIPAKQ8N1N5 446 aa11.02□□□□□ -0.65
FARP1-235ENST00000601656 PUS3Q9BZE2 481 aaKnown RBP11.02□□□□□ -0.65
FARP1-235ENST00000601656 GRIP2Q9C0E4 1043 aa11.02□□□□□ -0.65
FARP1-235ENST00000601656 LIN7BQ9HAP6 207 aa11.02□□□□□ -0.65
FARP1-235ENST00000601656 USP40Q9NVE5 1235 aa11.02□□□□□ -0.65
FARP1-235ENST00000601656 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.02□□□□□ -0.65
FARP1-235ENST00000601656 THEGQ9P2T0 379 aa11.02□□□□□ -0.65
FARP1-235ENST00000601656 DOCK2Q92608 1830 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 TLR3O15455 904 aaKnown RBP11.01□□□□□ -0.65
FARP1-235ENST00000601656 VAMP4O75379 141 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 F13A1P00488 732 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 SOX5P35711 763 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 PABPC4Q13310 644 aaKnown RBP eCLIP11.01□□□□□ -0.65
FARP1-235ENST00000601656 HDAC1Q13547 482 aaPredicted RBP11.01□□□□□ -0.65
FARP1-235ENST00000601656 MPP2Q14168 576 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 PPP2R5AQ15172 486 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 CCL14Q16627 93 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 TMEM67Q5HYA8 995 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 EPHA10Q5JZY3 1008 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.01□□□□□ -0.65
FARP1-235ENST00000601656 ALYREFQ86V81 257 aaKnown RBP11.01□□□□□ -0.65
FARP1-235ENST00000601656 GATAD2BQ8WXI9 593 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 DNAAF4Q8WXU2 420 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 ASCC2Q9H1I8 757 aaPredicted RBP11.01□□□□□ -0.65
FARP1-235ENST00000601656 AAASQ9NRG9 546 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 DAGLAQ9Y4D2 1042 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 DOCK1Q14185 1865 aa11.01□□□□□ -0.65
FARP1-235ENST00000601656 AVPP01185 164 aa11□□□□□ -0.65
FARP1-235ENST00000601656 SLURP2P0DP57 97 aa11□□□□□ -0.65
FARP1-235ENST00000601656 MYCLP1P12525 358 aaPredicted RBP11□□□□□ -0.65
FARP1-235ENST00000601656 GRNP28799 593 aaKnown RBP11□□□□□ -0.65
FARP1-235ENST00000601656 GPC1P35052 558 aa11□□□□□ -0.65
FARP1-235ENST00000601656 SPP2Q13103 211 aa11□□□□□ -0.65
FARP1-235ENST00000601656 HSP90AB4PQ58FF6 505 aa11□□□□□ -0.65
FARP1-235ENST00000601656 LSRQ86X29 649 aaPredicted RBP11□□□□□ -0.65
FARP1-235ENST00000601656 FBXO27Q8NI29 283 aa11□□□□□ -0.65
FARP1-235ENST00000601656 SOCS4Q8WXH5 440 aa11□□□□□ -0.65
FARP1-235ENST00000601656 ZNF775Q96BV0 537 aaPredicted RBP11□□□□□ -0.65
FARP1-235ENST00000601656 TCF12Q99081 682 aa11□□□□□ -0.65
FARP1-235ENST00000601656 GAS2L1Q99501 681 aaPredicted RBP11□□□□□ -0.65
FARP1-235ENST00000601656 LRFN3Q9BTN0 628 aa11□□□□□ -0.65
FARP1-235ENST00000601656 ZNF576Q9H609 170 aa11□□□□□ -0.65
FARP1-235ENST00000601656 DZANK1Q9NVP4 752 aa11□□□□□ -0.65
FARP1-235ENST00000601656 MORF4L1Q9UBU8 362 aa11□□□□□ -0.65
FARP1-235ENST00000601656 RLFQ13129 1914 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 PIEZO1Q92508 2521 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 TTC24A2A3L6 582 aaPredicted RBP10.99□□□□□ -0.65
FARP1-235ENST00000601656 WNT7AO00755 349 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 ENC1O14682 589 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 PEX10O60683 326 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 DDAH1O94760 285 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 RGS2P41220 211 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 HMGCS2P54868 508 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 NFKB2Q00653 900 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 HLTFQ14527 1009 aaKnown RBP eCLIP10.99□□□□□ -0.65
FARP1-235ENST00000601656 LONRF2Q1L5Z9 754 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 SLC39A5Q6ZMH5 540 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 C19orf47Q8N9M1 422 aaKnown RBP10.99□□□□□ -0.65
FARP1-235ENST00000601656 USP6NLQ92738 828 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 PLD4Q96BZ4 506 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 SNX27Q96L92 541 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 NECAB3Q96P71 396 aaPredicted RBP10.99□□□□□ -0.65
FARP1-235ENST00000601656 SALL4Q9UJQ4 1053 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 MROH5Q6ZUA9 1318 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 ATRNL1Q5VV63 1379 aa10.99□□□□□ -0.65
FARP1-235ENST00000601656 MYH13Q9UKX3 1938 aa10.98□□□□□ -0.65
FARP1-235ENST00000601656 A0A087X0B3 334 aa10.98□□□□□ -0.65
FARP1-235ENST00000601656 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.98□□□□□ -0.65
FARP1-235ENST00000601656 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.98□□□□□ -0.65
FARP1-235ENST00000601656 FAM221AA4D161 298 aa10.98□□□□□ -0.65
FARP1-235ENST00000601656 DNM1LO00429 736 aa10.98□□□□□ -0.65
FARP1-235ENST00000601656 KRT18P05783 430 aaKnown RBP10.98□□□□□ -0.65
FARP1-235ENST00000601656 RGS3P49796 1198 aa10.98□□□□□ -0.65
FARP1-235ENST00000601656 CT47A1Q5JQC4 288 aaPredicted RBP10.98□□□□□ -0.65
FARP1-235ENST00000601656 PERM1Q5SV97 790 aa10.98□□□□□ -0.65
FARP1-235ENST00000601656 AKNAD1Q5T1N1 836 aa10.98□□□□□ -0.65
FARP1-235ENST00000601656 BNC2Q6ZN30 1099 aaPredicted RBP10.98□□□□□ -0.65
FARP1-235ENST00000601656 GPRC5AQ8NFJ5 357 aa10.98□□□□□ -0.65
FARP1-235ENST00000601656 WDR66Q8TBY9 1149 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms