RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 DAGLBQ8NCG7 672 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 NSUN7Q8NE18 718 aaKnown RBP19.21■□□□□ 0.67
TRIM28-215ENST00000601150 IL27Q8NEV9 243 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 CYP2W1Q8TAV3 490 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 KAT2BQ92831 832 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 TBC1D32Q96NH3 1257 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 KATNAL1Q9BW62 490 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 PRO3102Q9H379 93 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 KCNH7Q9NS40 1196 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 TBX21Q9UL17 535 aa19.21■□□□□ 0.67
TRIM28-215ENST00000601150 MEIS1O00470 390 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 F2P00734 622 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 RAG1P15918 1043 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 BMP8BP34820 402 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 CHMP4BP1P59074 171 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 MDM2Q00987 491 aaPredicted RBP19.2■□□□□ 0.66
TRIM28-215ENST00000601150 PTPN11Q06124 597 aaPredicted RBP19.2■□□□□ 0.66
TRIM28-215ENST00000601150 GPR20Q99678 358 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 ALG1Q9BT22 464 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 PHF20Q9BVI0 1012 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 TRPV6Q9H1D0 765 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 PKD2L1Q9P0L9 805 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 PCDH10Q9P2E7 1040 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 KCNJ14Q9UNX9 436 aa19.2■□□□□ 0.66
TRIM28-215ENST00000601150 ST18O60284 1047 aa19.19■□□□□ 0.66
TRIM28-215ENST00000601150 B4GALT4O60513 344 aa19.19■□□□□ 0.66
TRIM28-215ENST00000601150 ARP10275 920 aa19.19■□□□□ 0.66
TRIM28-215ENST00000601150 FDPSP14324 419 aaKnown RBP19.19■□□□□ 0.66
TRIM28-215ENST00000601150 PSEN2P49810 448 aa19.19■□□□□ 0.66
TRIM28-215ENST00000601150 ST3GAL1Q11201 340 aa19.19■□□□□ 0.66
TRIM28-215ENST00000601150 NPY5RQ15761 445 aa19.19■□□□□ 0.66
TRIM28-215ENST00000601150 BACH2Q9BYV9 841 aa19.19■□□□□ 0.66
TRIM28-215ENST00000601150 SH2B1Q9NRF2 756 aaPredicted RBP19.19■□□□□ 0.66
TRIM28-215ENST00000601150 FAM86B1E9PN63 330 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 M0R2N6 131 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 HAS3O00219 553 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 JAK2O60674 1132 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 FAM86B2P0C5J1 330 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 SUPT20HL2P0C7V6 817 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 SP4Q02446 784 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 MFSD10Q14728 455 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 PLA2G4DQ86XP0 818 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 CCDC83Q8IWF9 413 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 PPP1R13LQ8WUF5 828 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 BADQ92934 168 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 SDF4Q9BRK5 362 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 UBE2OQ9C0C9 1292 aaKnown RBP19.18■□□□□ 0.66
TRIM28-215ENST00000601150 AGO4Q9HCK5 861 aaKnown RBP19.18■□□□□ 0.66
TRIM28-215ENST00000601150 NFASCO94856 1347 aa19.18■□□□□ 0.66
TRIM28-215ENST00000601150 IGLV3-22A0A075B6J6 115 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 TIMP1P01033 207 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 LGALS2P05162 132 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 CIITAP33076 1130 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 USP11P51784 963 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 KIAA0753Q2KHM9 967 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 SESTD1Q86VW0 696 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 C7orf31Q8N865 590 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 LLPHQ9BRT6 129 aaKnown RBP19.17■□□□□ 0.66
TRIM28-215ENST00000601150 C16orf70Q9BSU1 422 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 JPH1Q9HDC5 661 aaPredicted RBP19.17■□□□□ 0.66
TRIM28-215ENST00000601150 GJB4Q9NTQ9 266 aa19.17■□□□□ 0.66
TRIM28-215ENST00000601150 TRMT13Q9NUP7 481 aaKnown RBP19.17■□□□□ 0.66
TRIM28-215ENST00000601150 A0A1W2PPC1 479 aa19.16■□□□□ 0.66
TRIM28-215ENST00000601150 ITGB8P26012 769 aa19.16■□□□□ 0.66
TRIM28-215ENST00000601150 SETQ01105 290 aaPredicted RBP19.16■□□□□ 0.66
TRIM28-215ENST00000601150 HABP4Q5JVS0 413 aaKnown RBP19.16■□□□□ 0.66
TRIM28-215ENST00000601150 KRT25Q7Z3Z0 450 aa19.16■□□□□ 0.66
TRIM28-215ENST00000601150 TBCKQ8TEA7 893 aa19.16■□□□□ 0.66
TRIM28-215ENST00000601150 SEPT1Q8WYJ6 367 aa19.16■□□□□ 0.66
TRIM28-215ENST00000601150 SLC9A2Q9UBY0 812 aa19.16■□□□□ 0.66
TRIM28-215ENST00000601150 TELO2Q9Y4R8 837 aa19.16■□□□□ 0.66
TRIM28-215ENST00000601150 H3BRB1 525 aa19.15■□□□□ 0.66
TRIM28-215ENST00000601150 TCF7P36402 384 aaPredicted RBP19.15■□□□□ 0.66
TRIM28-215ENST00000601150 ITGB3BPQ13352 177 aaPredicted RBP19.15■□□□□ 0.66
TRIM28-215ENST00000601150 TRIM29Q14134 588 aa19.15■□□□□ 0.66
TRIM28-215ENST00000601150 NONOQ15233 471 aaKnown RBP eCLIP19.15■□□□□ 0.66
TRIM28-215ENST00000601150 PRR16Q569H4 304 aa19.15■□□□□ 0.66
TRIM28-215ENST00000601150 UTP14CQ5TAP6 766 aaKnown RBP19.15■□□□□ 0.66
TRIM28-215ENST00000601150 PPP1R12CQ9BZL4 782 aa19.15■□□□□ 0.66
TRIM28-215ENST00000601150 HIPK3Q9H422 1215 aa19.15■□□□□ 0.66
TRIM28-215ENST00000601150 TUT1Q9H6E5 874 aaKnown RBP19.15■□□□□ 0.66
TRIM28-215ENST00000601150 HDAC6Q9UBN7 1215 aa19.15■□□□□ 0.66
TRIM28-215ENST00000601150 ZNF215Q9UL58 517 aaPredicted RBP19.15■□□□□ 0.66
TRIM28-215ENST00000601150 NOD1Q9Y239 953 aa19.15■□□□□ 0.66
TRIM28-215ENST00000601150 TRIP12Q14669 1992 aaPredicted RBP19.15■□□□□ 0.66
TRIM28-215ENST00000601150 KAT6AQ92794 2004 aa19.15■□□□□ 0.66
TRIM28-215ENST00000601150 CCDC194A0A1B0GVG4 234 aa19.14■□□□□ 0.65
TRIM28-215ENST00000601150 GSTTP1A0A1W2PQM5 241 aa19.14■□□□□ 0.65
TRIM28-215ENST00000601150 PTGISQ16647 500 aa19.14■□□□□ 0.65
TRIM28-215ENST00000601150 GDF6Q6KF10 455 aaPredicted RBP19.14■□□□□ 0.65
TRIM28-215ENST00000601150 NOC4LQ9BVI4 516 aaKnown RBP19.14■□□□□ 0.65
TRIM28-215ENST00000601150 BRMS1Q9HCU9 246 aa19.14■□□□□ 0.65
TRIM28-215ENST00000601150 GTF2IRD1Q9UHL9 959 aa19.14■□□□□ 0.65
TRIM28-215ENST00000601150 IPO5O00410 1097 aaKnown RBP19.13■□□□□ 0.65
TRIM28-215ENST00000601150 EDIL3O43854 480 aa19.13■□□□□ 0.65
TRIM28-215ENST00000601150 CYP2C9P11712 490 aa19.13■□□□□ 0.65
TRIM28-215ENST00000601150 CYP2C18P33260 490 aa19.13■□□□□ 0.65
TRIM28-215ENST00000601150 KRT2P35908 639 aa19.13■□□□□ 0.65
TRIM28-215ENST00000601150 MCM2P49736 904 aa19.13■□□□□ 0.65
TRIM28-215ENST00000601150 HMGN5P82970 282 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms