RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 ATOH1Q92858 354 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-219ENST00000600879 GPKOWQ92917 476 aaPredicted RBP eCLIP11.62□□□□□ -0.55
HIF3A-219ENST00000600879 EMID1Q96A84 441 aaPredicted RBP11.62□□□□□ -0.55
HIF3A-219ENST00000600879 FAM227BQ96M60 508 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 IWS1Q96ST2 819 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 POP1Q99575 1024 aaKnown RBP11.62□□□□□ -0.55
HIF3A-219ENST00000600879 BCAS3Q9H6U6 928 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 PXMP2Q9NR77 195 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 TLR9Q9NR96 1032 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 CD207Q9UJ71 328 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 ATG2AQ2TAZ0 1938 aa11.62□□□□□ -0.55
HIF3A-219ENST00000600879 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 SMIM10L2AP0DMW4 78 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 SMIM10L2BP0DMW5 78 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 MX1P20591 662 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 DNAJB1P25685 340 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 NDUFV1P49821 464 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 ZXDAP98168 799 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
HIF3A-219ENST00000600879 SP2Q02086 613 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 QRICH1Q2TAL8 776 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 GPATCH4Q5T3I0 446 aaKnown RBP11.61□□□□□ -0.55
HIF3A-219ENST00000600879 MYSM1Q5VVJ2 828 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 ASCL5Q7RTU5 278 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 MCF2L2Q86YR7 1114 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 TBC1D10CQ8IV04 446 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 FBXL6Q8N531 539 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 FIBCD1Q8N539 461 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 IL17RAQ96F46 866 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 C16orf70Q9BSU1 422 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 NLRC5Q86WI3 1866 aa11.61□□□□□ -0.55
HIF3A-219ENST00000600879 NEDD4P46934 1319 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 KIAA1217Q5T5P2 1943 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 COL4A6Q14031 1691 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 UBA1P22314 1058 aaKnown RBP11.6□□□□□ -0.55
HIF3A-219ENST00000600879 SP100P23497 879 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-219ENST00000600879 CAMK1Q14012 370 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 ALX1Q15699 326 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 CELF3Q5SZQ8 465 aaKnown RBP11.6□□□□□ -0.55
HIF3A-219ENST00000600879 MFSD6Q6ZSS7 791 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 BMP8AQ7Z5Y6 402 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 RBM23Q86U06 439 aaKnown RBP11.6□□□□□ -0.55
HIF3A-219ENST00000600879 IL31RAQ8NI17 732 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 RPGRIP1Q96KN7 1286 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 TTC14Q96N46 770 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 CLEC1BQ9P126 229 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 BARX2Q9UMQ3 279 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-219ENST00000600879 MRPL11Q9Y3B7 192 aaKnown RBP11.6□□□□□ -0.55
HIF3A-219ENST00000600879 TELO2Q9Y4R8 837 aa11.6□□□□□ -0.55
HIF3A-219ENST00000600879 H3BRB1 525 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 PPFIA4O75335 1185 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
HIF3A-219ENST00000600879 HOXD8P13378 290 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-219ENST00000600879 HOXA13P31271 388 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-219ENST00000600879 BMPR1AP36894 532 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 ADAM15Q13444 863 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 ZNF589Q86UQ0 364 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-219ENST00000600879 PNMA1Q8ND90 353 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 MSLNLQ96KJ4 702 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 PDCD2LQ9BRP1 358 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 C11orf84Q9BUA3 381 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-219ENST00000600879 RNPEPQ9H4A4 650 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 TUT1Q9H6E5 874 aaKnown RBP11.59□□□□□ -0.55
HIF3A-219ENST00000600879 MLXIPQ9HAP2 919 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 HELLSQ9NRZ9 838 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 SETD4Q9NVD3 440 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 KMT2EQ8IZD2 1858 aa11.59□□□□□ -0.55
HIF3A-219ENST00000600879 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.55
HIF3A-219ENST00000600879 LOC730098B7Z3J9 87 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 OPLAHO14841 1288 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 NCK2O43639 380 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 KDM4AO75164 1064 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 LGALS2P05162 132 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 GHRP10912 638 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 IBSPP21815 317 aaPredicted RBP11.58□□□□□ -0.56
HIF3A-219ENST00000600879 AVPR2P30518 371 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 NRIP1P48552 1158 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 AAMPQ13685 434 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 TRIM50Q86XT4 487 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 ASIC4Q96FT7 647 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 KAT14Q9H8E8 782 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 JMJD4Q9H9V9 463 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.56
HIF3A-219ENST00000600879 CCDC171Q6TFL3 1326 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 ADGRA3Q8IWK6 1321 aa11.58□□□□□ -0.56
HIF3A-219ENST00000600879 MYO15AQ9UKN7 3530 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 C5orf67F2Z3F1 127 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 NOP56O00567 594 aaKnown RBP11.57□□□□□ -0.56
HIF3A-219ENST00000600879 PER2O15055 1255 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 PPFIA3O75145 1194 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 GLP2RO95838 553 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 RB1P06400 928 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 HSD17B4P51659 736 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 SP4Q02446 784 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 NMIQ13287 307 aaPredicted RBP11.57□□□□□ -0.56
HIF3A-219ENST00000600879 BTG3Q14201 252 aaPredicted RBP11.57□□□□□ -0.56
HIF3A-219ENST00000600879 PGM5Q15124 567 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 MCMDC2Q4G0Z9 681 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 PAN2Q504Q3 1202 aaKnown RBP11.57□□□□□ -0.56
HIF3A-219ENST00000600879 UTP14CQ5TAP6 766 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms