RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 IKBKBO14920 756 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 MAFGO15525 162 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 STAM2O75886 525 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 ERCC3P19447 782 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 MCM6Q14566 821 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 NLRX1Q86UT6 975 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 CATSPER3Q86XQ3 398 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 BRI3BPQ8WY22 251 aa19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 CCDC47Q96A33 483 aaKnown RBP19.77■□□□□ 0.75
SHKBP1-224ENST00000600718 EML1O00423 815 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 SPATA31C1P0DKV0 1188 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 HUNKP57058 714 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 MKRN3Q13064 507 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 Q3C1V9 767 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 B3GNT9Q6UX72 402 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 KCNK18Q7Z418 384 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 GPRASP2Q96D09 838 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 EIF2AK1Q9BQI3 630 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 TUFT1Q9NNX1 390 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 TBC1D22BQ9NU19 505 aa19.76■□□□□ 0.75
SHKBP1-224ENST00000600718 POTEB3A0JP26 581 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 CNNM4Q6P4Q7 775 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 POTEBQ6S5H4 581 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 GTPBP4Q9BZE4 634 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 UNC45AQ9H3U1 944 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 MROH8Q9H579 483 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 KLRC4O43908 158 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 MUTP22033 750 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 ERCC5P28715 1186 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 TPM4P67936 248 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 DHX8Q14562 1220 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 EPHA7Q15375 998 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 ZNF658Q5TYW1 1059 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 SHCBP1Q8NEM2 672 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 HSD17B14Q9BPX1 270 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 DNM3Q9UQ16 869 aa19.75■□□□□ 0.75
SHKBP1-224ENST00000600718 TESPA1A2RU30 521 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 POTEB2H3BUK9 544 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 DHX15O43143 795 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 RHOBTB3O94955 611 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 CYP2C8P10632 490 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 ERVK-9P63128 1117 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 ERVK-24P63145 666 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 KMT5BQ4FZB7 885 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 SMCR8Q8TEV9 937 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 PDLIM2Q96JY6 352 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 INPP4AQ96PE3 977 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 ADD3Q9UEY8 706 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 MYMKA6NI61 221 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 GCLCP48506 637 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 ASIC1P78348 528 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 PLCB2Q00722 1185 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 MYL5Q02045 173 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 CNTN2Q02246 1040 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 CDHR1Q96JP9 859 aa19.74■□□□□ 0.75
SHKBP1-224ENST00000600718 PVALEFA0A1B0GWK0 134 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 E9PMD0 336 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 CHMP2AO43633 222 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 ADCY5O95622 1261 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 PLA2G4BP0C869 781 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 ITGB3BPQ13352 177 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 NCAPHQ15003 741 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 STXBP2Q15833 593 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 GPRC5AQ8NFJ5 357 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 NEK9Q8TD19 979 aa19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 BMP2KQ9NSY1 1161 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-224ENST00000600718 POTEFA5A3E0 1075 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 PPP1R3GB7ZBB8 358 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 AP5Z1O43299 807 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 SLITRK3O94933 977 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 ALDH5A1P51649 535 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 CCNA1P78396 465 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 POTEGQ6S5H5 508 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 FAM133AQ8N9E0 248 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 ENOX1Q8TC92 643 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 DYDC2Q96IM9 177 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 RGL1Q9NZL6 768 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 B4DLN1 442 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 EIF3JO75822 258 aaKnown RBP19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 GNPTABQ3T906 1256 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 SARM1Q6SZW1 724 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 UNC13DQ70J99 1090 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 MIER3Q7Z3K6 550 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 MMP19Q99542 508 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 EXOC1Q9NV70 894 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 PKD2L1Q9P0L9 805 aa19.72■□□□□ 0.75
SHKBP1-224ENST00000600718 TRPM7Q96QT4 1865 aa19.71■□□□□ 0.75
SHKBP1-224ENST00000600718 CD44P16070 742 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-224ENST00000600718 ZNF157P51786 506 aaPredicted RBP19.71■□□□□ 0.75
SHKBP1-224ENST00000600718 CYP4A11Q02928 519 aa19.71■□□□□ 0.75
SHKBP1-224ENST00000600718 KCTD2Q14681 263 aa19.71■□□□□ 0.75
SHKBP1-224ENST00000600718 DDX12PQ92771 950 aa19.71■□□□□ 0.75
SHKBP1-224ENST00000600718 PASKQ96RG2 1323 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 SOWAHBA6NEL2 793 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 DDX39AO00148 427 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 ATP9AO75110 1047 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 SSBP05455 408 aaKnown RBP eCLIP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 FCER1AP12319 257 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 SLC12A3P55017 1021 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 PDE4DQ08499 809 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms