RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 DDX20Q9UHI6 824 aaKnown RBP13.88□□□□□ -0.19
TGFB1-204ENST00000600196 ZHX1Q9UKY1 873 aaPredicted RBP13.88□□□□□ -0.19
TGFB1-204ENST00000600196 ELP1O95163 1332 aa13.88□□□□□ -0.19
TGFB1-204ENST00000600196 PCNTO95613 3336 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 A6NJR5 290 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 ZEB2O60315 1214 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 GAS7O60861 476 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 ATG7O95352 703 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 RARBP10826 455 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 HOXD8P13378 290 aaPredicted RBP13.87□□□□□ -0.19
TGFB1-204ENST00000600196 ELNP15502 786 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 CST5P28325 142 aaPredicted RBP13.87□□□□□ -0.19
TGFB1-204ENST00000600196 LONP1P36776 959 aaKnown RBP13.87□□□□□ -0.19
TGFB1-204ENST00000600196 SLC26A2P50443 739 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 JAK3P52333 1124 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 GJA9P57773 515 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 FBXO16Q8IX29 292 aaPredicted RBP13.87□□□□□ -0.19
TGFB1-204ENST00000600196 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 SEPT1Q8WYJ6 367 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
TGFB1-204ENST00000600196 ZNF333Q96JL9 665 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 USP28Q96RU2 1077 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 TSEN34Q9BSV6 310 aaKnown RBP13.87□□□□□ -0.19
TGFB1-204ENST00000600196 AP5M1Q9H0R1 490 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 MLXIPQ9HAP2 919 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
TGFB1-204ENST00000600196 SLC9A2Q9UBY0 812 aa13.87□□□□□ -0.19
TGFB1-204ENST00000600196 SRPRBQ9Y5M8 271 aaKnown RBP13.87□□□□□ -0.19
TGFB1-204ENST00000600196 KIAA1217Q5T5P2 1943 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 SPTLC2O15270 562 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 SLC37A4O43826 429 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 FARP2O94887 1054 aaPredicted RBP13.86□□□□□ -0.19
TGFB1-204ENST00000600196 SMPD1P17405 629 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 ATP2B1P20020 1258 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 UBA1P22314 1058 aaKnown RBP13.86□□□□□ -0.19
TGFB1-204ENST00000600196 ADCYAP1R1P41586 468 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 CPT1AP50416 773 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 STK38Q15208 465 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 LRCH2Q5VUJ6 765 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 EEPD1Q7L9B9 569 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 ARRDC4Q8NCT1 418 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 TTC12Q9H892 705 aaPredicted RBP13.86□□□□□ -0.19
TGFB1-204ENST00000600196 JPH1Q9HDC5 661 aaPredicted RBP13.86□□□□□ -0.19
TGFB1-204ENST00000600196 PDGFCQ9NRA1 345 aa13.86□□□□□ -0.19
TGFB1-204ENST00000600196 LRRC37A2A6NM11 1700 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 WDR64B1ANS9 1081 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 ATP9AO75110 1047 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 GGPS1O95749 300 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 GJB1P08034 283 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 XRCC6P12956 609 aaKnown RBP eCLIP13.85□□□□□ -0.19
TGFB1-204ENST00000600196 DNM1Q05193 864 aaKnown RBP13.85□□□□□ -0.19
TGFB1-204ENST00000600196 ITGB3BPQ13352 177 aaPredicted RBP13.85□□□□□ -0.19
TGFB1-204ENST00000600196 EPHA7Q15375 998 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 IGSF22Q8N9C0 903 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 KRI1Q8N9T8 703 aaKnown RBP13.85□□□□□ -0.19
TGFB1-204ENST00000600196 PCSK9Q8NBP7 692 aaKnown RBP13.85□□□□□ -0.19
TGFB1-204ENST00000600196 ERMNQ8TAM6 284 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 PYM1Q9BRP8 204 aaKnown RBP13.85□□□□□ -0.19
TGFB1-204ENST00000600196 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.85□□□□□ -0.19
TGFB1-204ENST00000600196 PCDHA10Q9Y5I2 948 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 CLIC4Q9Y696 253 aa13.85□□□□□ -0.19
TGFB1-204ENST00000600196 IGKV6D-21A0A0A0MT36 114 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 CUTAO60888 179 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 CABYRO75952 493 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 ECM2O94769 699 aaPredicted RBP13.84□□□□□ -0.19
TGFB1-204ENST00000600196 ARIH2O95376 493 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 PSAPP07602 524 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 TXKP42681 527 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 SP2Q02086 613 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 ARHGAP1Q07960 439 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 SPIRE1Q08AE8 756 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 LY6KQ17RY6 165 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 PRAMEF19Q5SWL8 479 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 HAUS3Q68CZ6 603 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 LHX8Q68G74 356 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 ADALQ6DHV7 355 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 MIS18BP1Q6P0N0 1132 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 PLPPR4Q7Z2D5 763 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 RNF180Q86T96 592 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 ANKLE1Q8NAG6 615 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 AFAP1L1Q8TED9 768 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 SPATA32Q96LK8 384 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 TMEM60Q9H2L4 133 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 VAV3Q9UKW4 847 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 PPME1Q9Y570 386 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 ZSWIM8A7E2V4 1837 aa13.84□□□□□ -0.19
TGFB1-204ENST00000600196 MCM3APO60318 1980 aa13.83□□□□□ -0.19
TGFB1-204ENST00000600196 MOXD2PA6NHM9 499 aa13.83□□□□□ -0.2
TGFB1-204ENST00000600196 NOP56O00567 594 aaKnown RBP13.83□□□□□ -0.2
TGFB1-204ENST00000600196 WNT7AO00755 349 aa13.83□□□□□ -0.2
TGFB1-204ENST00000600196 DYNC1LI2O43237 492 aaPredicted RBP13.83□□□□□ -0.2
TGFB1-204ENST00000600196 LGR5O75473 907 aa13.83□□□□□ -0.2
TGFB1-204ENST00000600196 LYPLA2O95372 231 aa13.83□□□□□ -0.2
TGFB1-204ENST00000600196 P4HBP07237 508 aaKnown RBP13.83□□□□□ -0.2
TGFB1-204ENST00000600196 CNGA1P29973 690 aa13.83□□□□□ -0.2
TGFB1-204ENST00000600196 DGKDQ16760 1214 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms