RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 SGSM3Q96HU1 749 aa9.06□□□□□ -0.96
LINC00343-208ENST00000599264 ADAM7Q9H2U9 754 aa9.06□□□□□ -0.96
LINC00343-208ENST00000599264 KIF27Q86VH2 1401 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 ARHGEF40Q8TER5 1519 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 CARMIL1Q5VZK9 1371 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 PHLDB1Q86UU1 1377 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 HGSO14964 777 aaPredicted RBP9.05□□□□□ -0.96
LINC00343-208ENST00000599264 MAFKO60675 156 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 DGKIO75912 1065 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 RAPGEF3O95398 923 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 DLX2Q07687 328 aaPredicted RBP9.05□□□□□ -0.96
LINC00343-208ENST00000599264 HSP90AA2PQ14568 343 aaPredicted RBP9.05□□□□□ -0.96
LINC00343-208ENST00000599264 NLRP10Q86W26 655 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 FAM126BQ8IXS8 530 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 CELF2-AS1Q8N7Q2 184 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 KYQ8NBH2 561 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 C11orf84Q9BUA3 381 aaPredicted RBP9.05□□□□□ -0.96
LINC00343-208ENST00000599264 CLDND1Q9NY35 253 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 ZNF652Q9Y2D9 606 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 SIGLEC1Q9BZZ2 1709 aa9.05□□□□□ -0.96
LINC00343-208ENST00000599264 A0A1W2PQU0 124 aa9.04□□□□□ -0.96
LINC00343-208ENST00000599264 ARNTLO00327 626 aa9.04□□□□□ -0.96
LINC00343-208ENST00000599264 NKX3-2P78367 333 aa9.04□□□□□ -0.96
LINC00343-208ENST00000599264 SMAD4Q13485 552 aaKnown RBP9.04□□□□□ -0.96
LINC00343-208ENST00000599264 UBXN11Q5T124 520 aa9.04□□□□□ -0.96
LINC00343-208ENST00000599264 SLC35F1Q5T1Q4 408 aa9.04□□□□□ -0.96
LINC00343-208ENST00000599264 ZFYVE27Q5T4F4 411 aa9.04□□□□□ -0.96
LINC00343-208ENST00000599264 GORASP1Q9BQQ3 440 aa9.04□□□□□ -0.96
LINC00343-208ENST00000599264 ABCA9Q8IUA7 1624 aa9.04□□□□□ -0.96
LINC00343-208ENST00000599264 ABCA8O94911 1581 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 STEAP3Q658P3 488 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 C1orf159Q96HA4 380 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 IER2Q9BTL4 223 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 TRIM55Q9BYV6 548 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 EPB41L1Q9H4G0 881 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 SPATA6Q9NWH7 488 aaPredicted RBP9.03□□□□□ -0.96
LINC00343-208ENST00000599264 NPFFR2Q9Y5X5 522 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 YEATS2Q9ULM3 1422 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 TTC37Q6PGP7 1564 aa9.03□□□□□ -0.96
LINC00343-208ENST00000599264 RICTORQ6R327 1708 aa9.02□□□□□ -0.96
LINC00343-208ENST00000599264 KLF4O43474 513 aa9.02□□□□□ -0.97
LINC00343-208ENST00000599264 CAPNS1P04632 268 aa9.02□□□□□ -0.97
LINC00343-208ENST00000599264 LCP1P13796 627 aa9.02□□□□□ -0.97
LINC00343-208ENST00000599264 ST13P5Q8NFI4 369 aaPredicted RBP9.02□□□□□ -0.97
LINC00343-208ENST00000599264 GPR27Q9NS67 375 aa9.02□□□□□ -0.97
LINC00343-208ENST00000599264 PCDHB4Q9Y5E5 795 aa9.02□□□□□ -0.97
LINC00343-208ENST00000599264 IQSEC2Q5JU85 1478 aa9.02□□□□□ -0.97
LINC00343-208ENST00000599264 LTBP4Q8N2S1 1624 aa9.02□□□□□ -0.97
LINC00343-208ENST00000599264 KRIT1O00522 736 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 RPL13P26373 211 aaKnown RBP9.01□□□□□ -0.97
LINC00343-208ENST00000599264 THBS2P35442 1172 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 GRIA2P42262 883 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 PLP2Q04941 152 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 DENND5AQ6IQ26 1287 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 RSPO2Q6UXX9 243 aaPredicted RBP9.01□□□□□ -0.97
LINC00343-208ENST00000599264 FAM26EQ8N5C1 309 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 PHOSPHO1Q8TCT1 267 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 AARSD1Q9BTE6 412 aaKnown RBP9.01□□□□□ -0.97
LINC00343-208ENST00000599264 FBXL7Q9UJT9 491 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 NEO1Q92859 1461 aa9.01□□□□□ -0.97
LINC00343-208ENST00000599264 ADAMTS20P59510 1910 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 U2SURPO15042 1029 aaKnown RBP9□□□□□ -0.97
LINC00343-208ENST00000599264 NOBOXO60393 691 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 STK10O94804 968 aaKnown RBP9□□□□□ -0.97
LINC00343-208ENST00000599264 STAT5AP42229 794 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 RAB33AQ14088 237 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 EMC4Q5J8M3 183 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 USP53Q70EK8 1073 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 FAM124AQ86V42 546 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 CKAP2LQ8IYA6 745 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 LRRC47Q8N1G4 583 aaKnown RBP9□□□□□ -0.97
LINC00343-208ENST00000599264 TOE1Q96GM8 510 aaKnown RBP9□□□□□ -0.97
LINC00343-208ENST00000599264 BDH2Q9BUT1 245 aa9□□□□□ -0.97
LINC00343-208ENST00000599264 ITGA1P56199 1179 aa8.99□□□□□ -0.97
LINC00343-208ENST00000599264 ZC3H6P61129 1189 aaKnown RBP8.99□□□□□ -0.97
LINC00343-208ENST00000599264 KIAA2012Q0VF49 1180 aa8.99□□□□□ -0.97
LINC00343-208ENST00000599264 RTP5Q14D33 572 aa8.99□□□□□ -0.97
LINC00343-208ENST00000599264 SKOR2Q2VWA4 1001 aaPredicted RBP8.99□□□□□ -0.97
LINC00343-208ENST00000599264 ZNF761Q86XN6 746 aaPredicted RBP8.99□□□□□ -0.97
LINC00343-208ENST00000599264 ADAMTS17Q8TE56 1095 aa8.99□□□□□ -0.97
LINC00343-208ENST00000599264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC00343-208ENST00000599264 SMOC1Q9H4F8 434 aa8.99□□□□□ -0.97
LINC00343-208ENST00000599264 DTLQ9NZJ0 730 aa8.99□□□□□ -0.97
LINC00343-208ENST00000599264 POGZQ7Z3K3 1410 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 FANCAO15360 1455 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 DLX3O60479 287 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 TADA3O75528 432 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 CYP7B1O75881 506 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 FAM26FQ5R3K3 315 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 DPH6Q7L8W6 267 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 TRIM48Q8IWZ4 208 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 DCAF4Q8WV16 495 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 IGSF5Q9NSI5 407 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 MYOTQ9UBF9 498 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 PPP1R1BQ9UD71 204 aaPredicted RBP8.98□□□□□ -0.97
LINC00343-208ENST00000599264 CNOT11Q9UKZ1 510 aaKnown RBP8.98□□□□□ -0.97
LINC00343-208ENST00000599264 NUB1Q9Y5A7 615 aa8.98□□□□□ -0.97
LINC00343-208ENST00000599264 PTPRTO14522 1441 aa8.97□□□□□ -0.97
LINC00343-208ENST00000599264 TCRBV5S2A0A599 114 aa8.97□□□□□ -0.97
LINC00343-208ENST00000599264 PRICKLE3O43900 615 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms