RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MMP1P03956 469 aa18.15■□□□□ 0.5
LIG1-214ENST00000597146 RB1P06400 928 aa18.15■□□□□ 0.5
LIG1-214ENST00000597146 CAMK1Q14012 370 aa18.15■□□□□ 0.5
LIG1-214ENST00000597146 CBX2Q14781 532 aaPredicted RBP18.15■□□□□ 0.5
LIG1-214ENST00000597146 STXBP2Q15833 593 aa18.15■□□□□ 0.5
LIG1-214ENST00000597146 SMRP1Q8NCR6 262 aa18.15■□□□□ 0.5
LIG1-214ENST00000597146 ATP6V0A1Q93050 837 aa18.15■□□□□ 0.5
LIG1-214ENST00000597146 CPVLQ9H3G5 476 aa18.15■□□□□ 0.5
LIG1-214ENST00000597146 MRVI1Q9Y6F6 885 aa18.15■□□□□ 0.5
LIG1-214ENST00000597146 TOP1P11387 765 aaKnown RBP18.14■□□□□ 0.49
LIG1-214ENST00000597146 HOXD8P13378 290 aaPredicted RBP18.14■□□□□ 0.49
LIG1-214ENST00000597146 EIF2AK2P19525 551 aaKnown RBP18.14■□□□□ 0.49
LIG1-214ENST00000597146 ZNF543Q08ER8 600 aa18.14■□□□□ 0.49
LIG1-214ENST00000597146 LAMC2Q13753 1193 aa18.14■□□□□ 0.49
LIG1-214ENST00000597146 NSUN6Q8TEA1 469 aaKnown RBP18.14■□□□□ 0.49
LIG1-214ENST00000597146 RC3H2Q9HBD1 1191 aaKnown RBP18.14■□□□□ 0.49
LIG1-214ENST00000597146 PNMA2Q9UL42 364 aa18.14■□□□□ 0.49
LIG1-214ENST00000597146 BARX2Q9UMQ3 279 aaPredicted RBP18.14■□□□□ 0.49
LIG1-214ENST00000597146 USP15Q9Y4E8 981 aaPredicted RBP18.14■□□□□ 0.49
LIG1-214ENST00000597146 ZNF292O60281 2723 aa18.14■□□□□ 0.49
LIG1-214ENST00000597146 TTC3P53804 2025 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 DMXL1Q9Y485 3027 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 C17orf102A2RUQ5 167 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 PRR23AA6NEV1 266 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 PROB1E7EW31 1015 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 TREHO43280 583 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 KDM4AO75164 1064 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 RGS20O76081 388 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 RPGRIP1Q96KN7 1286 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 RMDN3Q96TC7 470 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 IRF2BPLQ9H1B7 796 aa18.13■□□□□ 0.49
LIG1-214ENST00000597146 ZBTB47Q9UFB7 747 aaPredicted RBP18.13■□□□□ 0.49
LIG1-214ENST00000597146 CACNA1BQ00975 2339 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 GLP2RO95838 553 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 DNAJB1P25685 340 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 COASYQ13057 564 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 HSDL1Q3SXM5 330 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 ERMP1Q7Z2K6 904 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 RGS22Q8NE09 1264 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 CLP1Q92989 425 aaKnown RBP18.12■□□□□ 0.49
LIG1-214ENST00000597146 C16orf70Q9BSU1 422 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 TOMM22Q9NS69 142 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 RWDD3Q9Y3V2 267 aa18.12■□□□□ 0.49
LIG1-214ENST00000597146 KAT6AQ92794 2004 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 ORC4O43929 436 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 GOLGA8HP0CJ92 632 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 SMIM10L2AP0DMW4 78 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 SMIM10L2BP0DMW5 78 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 HOXC8P31273 242 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 RRP12Q5JTH9 1297 aaKnown RBP18.11■□□□□ 0.49
LIG1-214ENST00000597146 ARHGEF16Q5VV41 709 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 EFHBQ8N7U6 833 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 APBB2Q92870 758 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 SPATA33Q96N06 139 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 IWS1Q96ST2 819 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 PLAGL2Q9UPG8 496 aa18.11■□□□□ 0.49
LIG1-214ENST00000597146 GGPS1O95749 300 aa18.1■□□□□ 0.49
LIG1-214ENST00000597146 NRIP1P48552 1158 aa18.1■□□□□ 0.49
LIG1-214ENST00000597146 BTG3Q14201 252 aaPredicted RBP18.1■□□□□ 0.49
LIG1-214ENST00000597146 CDC37Q16543 378 aaPredicted RBP18.1■□□□□ 0.49
LIG1-214ENST00000597146 ZMYM1Q5SVZ6 1142 aa18.1■□□□□ 0.49
LIG1-214ENST00000597146 MYSM1Q5VVJ2 828 aa18.1■□□□□ 0.49
LIG1-214ENST00000597146 PHF7Q9BWX1 381 aaPredicted RBP18.1■□□□□ 0.49
LIG1-214ENST00000597146 UBA5Q9GZZ9 404 aa18.1■□□□□ 0.49
LIG1-214ENST00000597146 TRPC6Q9Y210 931 aa18.1■□□□□ 0.49
LIG1-214ENST00000597146 PCDHGC5Q9Y5F6 944 aa18.1■□□□□ 0.49
LIG1-214ENST00000597146 DNAH14Q0VDD8 3507 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 ABCB11O95342 1321 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 GALR2O43603 387 aaPredicted RBP18.09■□□□□ 0.49
LIG1-214ENST00000597146 PPFIA4O75335 1185 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 EIF3JO75822 258 aaKnown RBP18.09■□□□□ 0.49
LIG1-214ENST00000597146 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 RBM10P98175 930 aaKnown RBP18.09■□□□□ 0.49
LIG1-214ENST00000597146 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 VPS53Q5VIR6 699 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 RBM23Q86U06 439 aaKnown RBP18.09■□□□□ 0.49
LIG1-214ENST00000597146 GPATCH3Q96I76 525 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 PXMP2Q9NR77 195 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 ANAPC4Q9UJX5 808 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 LOXHD1Q8IVV2 1947 aa18.09■□□□□ 0.49
LIG1-214ENST00000597146 EPG5Q9HCE0 2579 aa18.08■□□□□ 0.49
LIG1-214ENST00000597146 CAND2O75155 1236 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 ITGB1P05556 798 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 NR3C2P08235 984 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 UBA1P22314 1058 aaKnown RBP18.08■□□□□ 0.48
LIG1-214ENST00000597146 ICAM3P32942 547 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 NBL1P41271 181 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 ID4P47928 161 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 CELF3Q5SZQ8 465 aaKnown RBP18.08■□□□□ 0.48
LIG1-214ENST00000597146 PPP2R3CQ969Q6 453 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 ZNF689Q96CS4 500 aaPredicted RBP18.08■□□□□ 0.48
LIG1-214ENST00000597146 PLVAPQ9BX97 442 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 RNPEPQ9H4A4 650 aa18.08■□□□□ 0.48
LIG1-214ENST00000597146 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.48
LIG1-214ENST00000597146 MRPL42Q9Y6G3 142 aaKnown RBP18.08■□□□□ 0.48
LIG1-214ENST00000597146 MYO10Q9HD67 2058 aa18.07■□□□□ 0.48
LIG1-214ENST00000597146 H3BRB1 525 aa18.07■□□□□ 0.48
LIG1-214ENST00000597146 LGALS2P05162 132 aa18.07■□□□□ 0.48
LIG1-214ENST00000597146 FGRP09769 529 aa18.07■□□□□ 0.48
LIG1-214ENST00000597146 GHRP10912 638 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms