RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 EYA4O95677 639 aa16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 RB1P06400 928 aa16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 VPS53Q5VIR6 699 aa16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 ADGRD2Q7Z7M1 963 aa16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 ASIC4Q96FT7 647 aa16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 C11orf84Q9BUA3 381 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 LMAN2LQ9H0V9 348 aa16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 NLRC5Q86WI3 1866 aa16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 C17orf102A2RUQ5 167 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 PPFIA4O75335 1185 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 DNAJB1P25685 340 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 ZMYM1Q5SVZ6 1142 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 MYSM1Q5VVJ2 828 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 RPGRIP1Q96KN7 1286 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 SPATA33Q96N06 139 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 C16orf70Q9BSU1 422 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
SHKBP1-208ENST00000595726 KMT2EQ8IZD2 1858 aa16.08■□□□□ 0.17
SHKBP1-208ENST00000595726 ORC4O43929 436 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 RGS20O76081 388 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 PDGFBP01127 241 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 NR3C2P08235 984 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 HOXD8P13378 290 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 SP2Q02086 613 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 SIGLEC14Q08ET2 396 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 CBX2Q14781 532 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 RBM23Q86U06 439 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 BCAS3Q9H6U6 928 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 PLAGL2Q9UPG8 496 aa16.08■□□□□ 0.16
SHKBP1-208ENST00000595726 GGPS1O95749 300 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 MMP1P03956 469 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 SMIM10L2AP0DMW4 78 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 SMIM10L2BP0DMW5 78 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 CELF3Q5SZQ8 465 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 SMRP1Q8NCR6 262 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 CLP1Q92989 425 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 FSD1Q9BTV5 496 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 BARX2Q9UMQ3 279 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 PCDHGC5Q9Y5F6 944 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 COL4A6Q14031 1691 aa16.07■□□□□ 0.16
SHKBP1-208ENST00000595726 ADGRA3Q8IWK6 1321 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 FGRP09769 529 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 SNHG28P0DPA3 235 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 NRIP1P48552 1158 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 GPKOWQ92917 476 aaPredicted RBP eCLIP16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 SETD4Q9NVD3 440 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 FAM186AA6NE01 2351 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 KIAA1217Q5T5P2 1943 aa16.06■□□□□ 0.16
SHKBP1-208ENST00000595726 PLXNA3P51805 1871 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 ZNF292O60281 2723 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 ABCB11O95342 1321 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 H3BRB1 525 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 GLP2RO95838 553 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 HOXC8P31273 242 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 BTG3Q14201 252 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 EFHBQ8N7U6 833 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 TUT1Q9H6E5 874 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 RC3H2Q9HBD1 1191 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 TCP11L1Q9NUJ3 509 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 TRPC6Q9Y210 931 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 RALGAPA2Q2PPJ7 1873 aa16.05■□□□□ 0.16
SHKBP1-208ENST00000595726 PROB1E7EW31 1015 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 ENPP3O14638 875 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 KDM4AO75164 1064 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 CFBP00751 764 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 CHRNA1P02708 482 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 ITGB1P05556 798 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 GHRP10912 638 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 COASYQ13057 564 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 MCF2L2Q86YR7 1114 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 ADGRF4Q8IZF3 695 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 SPPL3Q8TCT6 385 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 APBB2Q92870 758 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 ZNF689Q96CS4 500 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 PHF7Q9BWX1 381 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 IRF2BPLQ9H1B7 796 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 VAT1LQ9HCJ6 419 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 RWDD3Q9Y3V2 267 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 GVINP1Q7Z2Y8 2422 aa16.04■□□□□ 0.16
SHKBP1-208ENST00000595726 PRR23AA6NEV1 266 aa16.03■□□□□ 0.16
SHKBP1-208ENST00000595726 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-208ENST00000595726 IL31RAQ8NI17 732 aa16.03■□□□□ 0.16
SHKBP1-208ENST00000595726 OTUD7AQ8TE49 926 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-208ENST00000595726 ZKSCAN3Q9BRR0 538 aa16.03■□□□□ 0.16
SHKBP1-208ENST00000595726 MLXIPQ9HAP2 919 aa16.03■□□□□ 0.16
SHKBP1-208ENST00000595726 MRPL42Q9Y6G3 142 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms