RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NT5C3AQ9H0P0 336 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 EPN3Q9H201 632 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 EPB41L5Q9HCM4 733 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 SMARCAL1Q9NZC9 954 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 NARFQ9UHQ1 456 aa14.58□□□□□ -0.08
VRK3-209ENST00000594948 ZNF233A6NK53 670 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 ANKRD65E5RJM6 399 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 NDUFAB1O14561 156 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 BUB1O43683 1085 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 EDIL3O43854 480 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 NAP1L1P55209 391 aaKnown RBP14.57□□□□□ -0.08
VRK3-209ENST00000594948 IFI16Q16666 785 aaKnown RBP14.57□□□□□ -0.08
VRK3-209ENST00000594948 SLC4A8Q2Y0W8 1093 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 FAM26FQ5R3K3 315 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 USP17L2Q6R6M4 530 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 CNPY4Q8N129 248 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 ANKRD13CQ8N6S4 541 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 LINC00116Q8NCU8 138 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 CASKIN2Q8WXE0 1202 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 MS4A14Q96JA4 679 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 PBKQ96KB5 322 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 ATP6V1G3Q96LB4 118 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 PSMB7Q99436 277 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 LSM14BQ9BX40 385 aaKnown RBP14.57□□□□□ -0.08
VRK3-209ENST00000594948 EHD4Q9H223 541 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 BMP2KQ9NSY1 1161 aaPredicted RBP14.57□□□□□ -0.08
VRK3-209ENST00000594948 TMEM260Q9NX78 707 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 NFU1Q9UMS0 254 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 GPR75-ASB3A0A0A6YYF3 556 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 TRAF5O00463 557 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 SLC37A4O43826 429 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 FSBPO95073 299 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 GCFC2P16383 781 aaKnown RBP14.57□□□□□ -0.08
VRK3-209ENST00000594948 KLRC1P26715 233 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 TM4SF1P30408 202 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 GUCY2DQ02846 1103 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 CUL1Q13616 776 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 CCDC65Q8IXS2 484 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 ARFGAP2Q8N6H7 521 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 USP38Q8NB14 1042 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 C3orf20Q8ND61 904 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 CALR3Q96L12 384 aaKnown RBP14.57□□□□□ -0.08
VRK3-209ENST00000594948 SETDB2Q96T68 719 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 ISCUQ9H1K1 167 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 GANQ9H2C0 597 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 PLCB1Q9NQ66 1216 aa14.57□□□□□ -0.08
VRK3-209ENST00000594948 BZW2Q9Y6E2 419 aaKnown RBP14.57□□□□□ -0.08
VRK3-209ENST00000594948 TDP2O95551 362 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 NR1D1P20393 614 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 LSP1P33241 339 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 PDCLQ13371 301 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 ASIC2Q16515 512 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 EDRF1Q3B7T1 1238 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 RC3H1Q5TC82 1133 aaKnown RBP14.56□□□□□ -0.08
VRK3-209ENST00000594948 MCTP2Q6DN12 878 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 TPTE2Q6XPS3 522 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 ZNF804AQ7Z570 1209 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 NBPF5PQ86XG9 351 aaPredicted RBP14.56□□□□□ -0.08
VRK3-209ENST00000594948 MAPKAPK5Q8IW41 473 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 TBC1D5Q92609 795 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 TAF4BQ92750 862 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 CPVLQ9H3G5 476 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 TAF1DQ9H5J8 278 aaPredicted RBP14.56□□□□□ -0.08
VRK3-209ENST00000594948 NLRC4Q9NPP4 1024 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 PANK4Q9NVE7 773 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 MTMR7Q9Y216 660 aa14.56□□□□□ -0.08
VRK3-209ENST00000594948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.56□□□□□ -0.08
VRK3-209ENST00000594948 GREB1LQ9C091 1923 aaPredicted RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 POTEMA6NI47 508 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 MEFVO15553 781 aaPredicted RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 PPP1R37O75864 691 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 KIAA0754O94854 1291 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 FAM153BP0C7A2 387 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 CLK2P49760 499 aaKnown RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 LIG3P49916 1009 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 POLR2FP61218 127 aaKnown RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 PTGISQ16647 500 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 FAM153CQ494X1 144 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 KCNK18Q7Z418 384 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 ACTRT1Q8TDG2 376 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 CEP95Q96GE4 821 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 RNPC3Q96LT9 517 aaKnown RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 KRT12Q99456 494 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 HINFPQ9BQA5 517 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 FAM153AQ9UHL3 310 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 PCDHA2Q9Y5H9 948 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 A0A0G2JS52 829 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 KRT14P02533 472 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 SNHG28P0DPA3 235 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 PDHBP11177 359 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 MDH1P40925 334 aaKnown RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 MRPS25P82663 173 aaKnown RBP14.55□□□□□ -0.08
VRK3-209ENST00000594948 ATP2B2Q01814 1243 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 KLHL30Q0D2K2 578 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 LRRC41Q15345 812 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 DIXDC1Q155Q3 683 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 KIAA0753Q2KHM9 967 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 BICDL1Q6ZP65 573 aa14.55□□□□□ -0.08
VRK3-209ENST00000594948 BARGINQ6ZT62 677 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms