RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 SKIV2LQ15477 1246 aaKnown RBP11.7□□□□□ -0.54
VMP1-214ENST00000592106 CCDC85BQ15834 202 aaPredicted RBP11.7□□□□□ -0.54
VMP1-214ENST00000592106 AAK1Q2M2I8 961 aa11.7□□□□□ -0.54
VMP1-214ENST00000592106 MB21D2Q8IYB1 491 aaPredicted RBP11.7□□□□□ -0.54
VMP1-214ENST00000592106 ZNF654Q8IZM8 581 aa11.7□□□□□ -0.54
VMP1-214ENST00000592106 SMARCC2Q8TAQ2 1214 aa11.7□□□□□ -0.54
VMP1-214ENST00000592106 MAP4K1Q92918 833 aa11.7□□□□□ -0.54
VMP1-214ENST00000592106 TMEM87BQ96K49 555 aa11.7□□□□□ -0.54
VMP1-214ENST00000592106 ZNF215Q9UL58 517 aaPredicted RBP11.7□□□□□ -0.54
VMP1-214ENST00000592106 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
VMP1-214ENST00000592106 FRMPD4Q14CM0 1322 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 C17orf102A2RUQ5 167 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 PRC1O43663 620 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 CYTH3O43739 400 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 RGS20O76081 388 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 CXCL10P02778 98 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 GNAT1P11488 350 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 SMARCA1P28370 1054 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 MCM5P33992 734 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 WDR5P61964 334 aaKnown RBP11.69□□□□□ -0.54
VMP1-214ENST00000592106 IKBKEQ14164 716 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 HSDL1Q3SXM5 330 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 XRRA1Q6P2D8 792 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 NLRX1Q86UT6 975 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 IL31RAQ8NI17 732 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 DHX38Q92620 1227 aaKnown RBP11.69□□□□□ -0.54
VMP1-214ENST00000592106 ASB2Q96Q27 587 aa11.69□□□□□ -0.54
VMP1-214ENST00000592106 H3BRB1 525 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 SORBS3O60504 671 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 CAND2O75155 1236 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 LGALS2P05162 132 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 ICAM3P32942 547 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 ANTXR2P58335 489 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
VMP1-214ENST00000592106 METTL7BQ6UX53 244 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 GIMAP8Q8ND71 665 aaPredicted RBP11.68□□□□□ -0.54
VMP1-214ENST00000592106 IGDCC4Q8TDY8 1250 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 ARNTL2Q8WYA1 636 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 CDHR1Q96JP9 859 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 INPP4AQ96PE3 977 aaPredicted RBP11.68□□□□□ -0.54
VMP1-214ENST00000592106 CTAGE1Q96RT6 745 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 USP26Q9BXU7 913 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 TUT1Q9H6E5 874 aaKnown RBP11.68□□□□□ -0.54
VMP1-214ENST00000592106 EHMT1Q9H9B1 1298 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 LY9Q9HBG7 655 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 PRDM6Q9NQX0 595 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 MYH7BA7E2Y1 1941 aa11.68□□□□□ -0.54
VMP1-214ENST00000592106 PIK3CDO00329 1044 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 NBNO60934 754 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 LGR5O75473 907 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 AMHP03971 560 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 POU3F3P20264 500 aaPredicted RBP11.67□□□□□ -0.54
VMP1-214ENST00000592106 THPOP40225 353 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 TAP1Q03518 808 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 SLC35G1Q2M3R5 365 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 TRIM71Q2Q1W2 868 aaKnown RBP11.67□□□□□ -0.54
VMP1-214ENST00000592106 ZNF618Q5T7W0 954 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 RNF20Q5VTR2 975 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 PCNX4Q63HM2 1172 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 SYNE3Q6ZMZ3 975 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 SERINC5Q86VE9 423 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 ADAMTS19Q8TE59 1207 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 ATP6V0A1Q93050 837 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 RAD9AQ99638 391 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 C16orf70Q9BSU1 422 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 CERS4Q9HA82 394 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 SENP2Q9HC62 589 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 SCUBE2Q9NQ36 999 aa11.67□□□□□ -0.54
VMP1-214ENST00000592106 TRIP12Q14669 1992 aaPredicted RBP11.67□□□□□ -0.54
VMP1-214ENST00000592106 A0A0C4DFX4 3053 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 SPDYE3A6NKU9 549 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 RSPH10B2B2RC85 870 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 SH2B2O14492 632 aaPredicted RBP11.66□□□□□ -0.54
VMP1-214ENST00000592106 GJB5O95377 273 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 RSPH10BP0C881 870 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 SMIM10L2AP0DMW4 78 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 SMIM10L2BP0DMW5 78 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 LIFRP42702 1097 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 DEFB103AP81534 67 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 UHRF1Q96T88 793 aaPredicted RBP11.66□□□□□ -0.54
VMP1-214ENST00000592106 SENP7Q9BQF6 1050 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 ESYT1Q9BSJ8 1104 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 MYL10Q9BUA6 226 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
VMP1-214ENST00000592106 ANO2Q9NQ90 1003 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 COG5Q9UP83 839 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 SLC12A7Q9Y666 1083 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 MTCH2Q9Y6C9 303 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 TAF6LQ9Y6J9 622 aa11.66□□□□□ -0.54
VMP1-214ENST00000592106 SPATA31C2B4DYI2 1134 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 SLC27A2O14975 620 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 MRPS9P82933 396 aaKnown RBP11.65□□□□□ -0.54
VMP1-214ENST00000592106 ZNF200P98182 395 aaPredicted RBP11.65□□□□□ -0.54
VMP1-214ENST00000592106 SP2Q02086 613 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 CREB3L3Q68CJ9 461 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 SEPT8Q92599 483 aa11.65□□□□□ -0.54
VMP1-214ENST00000592106 GPKOWQ92917 476 aaPredicted RBP eCLIP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms