RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 ITGAVP06756 1048 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 ITIH2P19823 946 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 CCT4P50991 539 aaKnown RBP9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 ZNF445P59923 1031 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 RBM6P78332 1123 aaKnown RBP9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 NMIQ13287 307 aaPredicted RBP9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 G2E3Q7L622 706 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 FIBCD1Q8N539 461 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 ZBTB38Q8NAP3 1195 aaPredicted RBP9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 HEXIM2Q96MH2 286 aaKnown RBP9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 HYPKQ9NX55 129 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 CHPF2Q9P2E5 772 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 LEMD3Q9Y2U8 911 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 SF3B6Q9Y3B4 125 aaKnown RBP9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 FHOD1Q9Y613 1164 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 PTCH2Q9Y6C5 1203 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 C5P01031 1676 aa9.63□□□□□ -0.87
NEDD4L-230ENST00000590638 A0A087WZG4 1122 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 TRAV20A0A0B4J274 112 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 A0A1W2PQU0 124 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 SHOXO15266 292 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 IGLV1-40P01703 118 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 FAM153BP0C7A2 387 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 SNW1Q13573 536 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 ZC3H12BQ5HYM0 836 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 CWF19L1Q69YN2 538 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 CENPQQ7L2Z9 268 aaPredicted RBP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 ZNF227Q86WZ6 799 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 SHKBP1Q8TBC3 707 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 PIWIL2Q8TC59 973 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 PIGBQ92521 554 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 AARSD1Q9BTE6 412 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 KANSL2Q9H9L4 492 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 DDX21Q9NR30 783 aaKnown RBP eCLIP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 CHST7Q9NS84 486 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 ZBTB40Q9NUA8 1239 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 PRR13Q9NZ81 148 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 TRPC5Q9UL62 973 aaPredicted RBP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 DIS3Q9Y2L1 958 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 DOT1LQ8TEK3 1739 aa9.62□□□□□ -0.87
NEDD4L-230ENST00000590638 KCPQ6ZWJ8 1503 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 N4BP2Q86UW6 1770 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 PRAMEF22A3QJZ6 481 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 PRR33A8MZF0 331 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 SIGLEC6O43699 453 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 H2AFB1P0C5Y9 115 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 H2AFB2P0C5Z0 115 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 ZNF865P0CJ78 1059 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 NCLP19338 710 aaKnown RBP9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 FSTP19883 344 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 LONRF2Q1L5Z9 754 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 C22orf34Q6ZV56 151 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 TMC3Q7Z5M5 1100 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 SHISA5Q8N114 240 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 MARCH10Q8NA82 808 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 SYTL5Q8TDW5 730 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 RCC1LQ96I51 464 aaKnown RBP9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 Q96M66 194 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 ZDHHC15Q96MV8 337 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 TEX13AQ9BXU3 409 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 RWDD1Q9H446 243 aaPredicted RBP9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 TMEM260Q9NX78 707 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 BCL9O00512 1426 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 ATRNO75882 1429 aa9.61□□□□□ -0.87
NEDD4L-230ENST00000590638 PXDNLA1KZ92 1463 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 ANKRD62A6NC57 917 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 KCNH1O95259 989 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 PRAMEF1O95521 474 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 DDX58O95786 925 aaKnown RBP9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 SQSTM1Q13501 440 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 TMEM67Q5HYA8 995 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 CDKAL1Q5VV42 579 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 EGFLAMQ63HQ2 1017 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 SLC4A10Q6U841 1118 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 FAM214BQ7L5A3 538 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 FAM181AQ8N9Y4 354 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 SYTL4Q96C24 671 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 TRIT1Q9H3H1 467 aaKnown RBP9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 GPATCH2Q9NW75 528 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 CGGBP1Q9UFW8 167 aaPredicted RBP9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 USP16Q9Y5T5 823 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 CAPN6Q9Y6Q1 641 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 THSD7AQ9UPZ6 1657 aa9.6□□□□□ -0.87
NEDD4L-230ENST00000590638 GLI3P10071 1580 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 PPP2R2AP63151 447 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 TNK2Q07912 1038 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 CPSF6Q16630 551 aaKnown RBP eCLIP9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 C16orf86Q6ZW13 317 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 ARHGEF39Q8N4T4 335 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 ENOX1Q8TC92 643 aaKnown RBP9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 DNAAF4Q8WXU2 420 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 LGR4Q9BXB1 951 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 ASAP1Q9ULH1 1129 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 EMC9Q9Y3B6 208 aa9.59□□□□□ -0.87
NEDD4L-230ENST00000590638 IGHDP01880 384 aa9.58□□□□□ -0.88
NEDD4L-230ENST00000590638 ANXA1P04083 346 aa9.58□□□□□ -0.88
NEDD4L-230ENST00000590638 GSK3AP49840 483 aa9.58□□□□□ -0.88
NEDD4L-230ENST00000590638 HDAC1Q13547 482 aaPredicted RBP9.58□□□□□ -0.88
NEDD4L-230ENST00000590638 TCEA2Q15560 299 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms