RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 GNAT1P11488 350 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 KCNJ6P48051 423 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 MRPS9P82933 396 aaKnown RBP8.74□□□□□ -1.01
NPC1-208ENST00000590301 PPP2R2DQ66LE6 453 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 PPP1R18Q6NYC8 613 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 DHX32Q7L7V1 743 aaKnown RBP8.74□□□□□ -1.01
NPC1-208ENST00000590301 SRBD1Q8N5C6 995 aaKnown RBP8.74□□□□□ -1.01
NPC1-208ENST00000590301 ZNF713Q8N859 430 aaPredicted RBP8.74□□□□□ -1.01
NPC1-208ENST00000590301 GPRASP2Q96D09 838 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 NEK1Q96PY6 1258 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 CTAGE1Q96RT6 745 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 C16orf70Q9BSU1 422 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 ALG1Q9BT22 464 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 MYL10Q9BUA6 226 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 GLT8D2Q9H1C3 349 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 TUT1Q9H6E5 874 aaKnown RBP8.74□□□□□ -1.01
NPC1-208ENST00000590301 PSTPIP2Q9H939 334 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 EHMT1Q9H9B1 1298 aa8.74□□□□□ -1.01
NPC1-208ENST00000590301 ZNF215Q9UL58 517 aaPredicted RBP8.74□□□□□ -1.01
NPC1-208ENST00000590301 SMCHD1A6NHR9 2005 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 ABHD14A-ACY1A0A1B0GW23 586 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 C17orf102A2RUQ5 167 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 SPDYE3A6NKU9 549 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 LGALS2P05162 132 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 CKBP12277 381 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 HOXC8P31273 242 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 SP2Q02086 613 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 CNKSR3Q6P9H4 555 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 APOA5Q6Q788 366 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 USP17L6PQ6QN14 398 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 SERINC5Q86VE9 423 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 HERC6Q8IVU3 1022 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 PIBF1Q8WXW3 757 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 DHX38Q92620 1227 aaKnown RBP8.73□□□□□ -1.01
NPC1-208ENST00000590301 SYMPKQ92797 1274 aaKnown RBP8.73□□□□□ -1.01
NPC1-208ENST00000590301 NKX2-4Q9H2Z4 354 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 PRDM12Q9H4Q4 367 aa8.73□□□□□ -1.01
NPC1-208ENST00000590301 YBX2Q9Y2T7 364 aaKnown RBP8.73□□□□□ -1.01
NPC1-208ENST00000590301 CCDC196A0A1B0GTZ2 297 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 ZBTB43O43298 467 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 FOSP01100 380 aaPredicted RBP8.72□□□□□ -1.01
NPC1-208ENST00000590301 RPLP2P05387 115 aaKnown RBP8.72□□□□□ -1.01
NPC1-208ENST00000590301 NUBP1P53384 320 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 EXOSC10Q01780 885 aaKnown RBP8.72□□□□□ -1.01
NPC1-208ENST00000590301 IKBKEQ14164 716 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 TRIM71Q2Q1W2 868 aaKnown RBP8.72□□□□□ -1.01
NPC1-208ENST00000590301 MCTP2Q6DN12 878 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 CYFIP1Q7L576 1253 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 HEATR3Q7Z4Q2 680 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 MICU3Q86XE3 530 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 GPR20Q99678 358 aa8.72□□□□□ -1.01
NPC1-208ENST00000590301 FARP1Q9Y4F1 1045 aaPredicted RBP8.72□□□□□ -1.01
NPC1-208ENST00000590301 RSPH10B2B2RC85 870 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 EPB41L2O43491 1005 aaKnown RBP8.71□□□□□ -1.02
NPC1-208ENST00000590301 CA3P07451 260 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 RSPH10BP0C881 870 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 SMIM10L2AP0DMW4 78 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 SMIM10L2BP0DMW5 78 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 RXRAP19793 462 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 POU3F3P20264 500 aaPredicted RBP8.71□□□□□ -1.02
NPC1-208ENST00000590301 RABGGTBP53611 331 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 WDR5P61964 334 aaKnown RBP8.71□□□□□ -1.02
NPC1-208ENST00000590301 SEMA3FQ13275 785 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 MTMR1Q13613 665 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 RTN1Q16799 776 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 KCNV2Q8TDN2 545 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 PPP1R13LQ8WUF5 828 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 ATXN2LQ8WWM7 1075 aaKnown RBP8.71□□□□□ -1.02
NPC1-208ENST00000590301 GPKOWQ92917 476 aaPredicted RBP eCLIP8.71□□□□□ -1.02
NPC1-208ENST00000590301 KCNB2Q92953 911 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 TNPO1Q92973 898 aaKnown RBP8.71□□□□□ -1.02
NPC1-208ENST00000590301 ATP6V0A1Q93050 837 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 CCDC136Q96JN2 1154 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 LRRC2Q9BYS8 371 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 TSPYL2Q9H2G4 693 aaPredicted RBP8.71□□□□□ -1.02
NPC1-208ENST00000590301 RIC8AQ9NPQ8 531 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 RTEL1Q9NZ71 1219 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 UBIAD1Q9Y5Z9 338 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 LCTP09848 1927 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 NRCAMQ92823 1304 aa8.71□□□□□ -1.02
NPC1-208ENST00000590301 KLF18A0A0U1RQI7 1052 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 GOLGA8AA7E2F4 631 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 GOLGA8BA8MQT2 603 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 TLL1O43897 1013 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 NBNO60934 754 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 LGR5O75473 907 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 REC8O95072 547 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 CHRM1P11229 460 aaPredicted RBP8.7□□□□□ -1.02
NPC1-208ENST00000590301 CD44P16070 742 aaKnown RBP8.7□□□□□ -1.02
NPC1-208ENST00000590301 KCNA2P16389 499 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 ITGB5P18084 799 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 IGFBP4P22692 258 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 THPOP40225 353 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 ADCY7P51828 1080 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 NAPAP54920 295 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 FGD1P98174 961 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 FUT2Q10981 343 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 AP3B2Q13367 1082 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 ADGRE1Q14246 886 aa8.7□□□□□ -1.02
NPC1-208ENST00000590301 GPNMBQ14956 572 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms