RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 ST3GAL1Q11201 340 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-210ENST00000590061 NONOQ15233 471 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMAD4-210ENST00000590061 SF3A1Q15459 793 aaKnown RBP8.34□□□□□ -1.07
SMAD4-210ENST00000590061 ZYXQ15942 572 aaKnown RBP8.34□□□□□ -1.07
SMAD4-210ENST00000590061 PKN1Q16512 942 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 QRICH1Q2TAL8 776 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 GADL1Q6ZQY3 521 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 RAB11FIP4Q86YS3 637 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 CCAR1Q8IX12 1150 aaKnown RBP8.34□□□□□ -1.07
SMAD4-210ENST00000590061 TNPO1Q92973 898 aaKnown RBP8.34□□□□□ -1.07
SMAD4-210ENST00000590061 RAB34Q9BZG1 259 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 MROH8Q9H579 483 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 SLC5A4Q9NY91 659 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 STK17AQ9UEE5 414 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 CCPG1Q9ULG6 757 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 SCAF8Q9UPN6 1271 aaKnown RBP8.34□□□□□ -1.07
SMAD4-210ENST00000590061 PFASO15067 1338 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 ELP1O95163 1332 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 SLC35F4A4IF30 521 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 TRAF5O00463 557 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 STAM2O75886 525 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 MBD3O95983 291 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 SLC16A2P36021 539 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 STAT3P40763 770 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 SCTRP47872 440 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 NOGQ13253 232 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 ARHGEF6Q15052 776 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 WWC2Q6AWC2 1192 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 MOXD1Q6UVY6 613 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 SAPCD2Q86UD0 394 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 CLEC10AQ8IUN9 316 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 SHCBP1Q8NEM2 672 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 SMCR8Q8TEV9 937 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-210ENST00000590061 SYAP1Q96A49 352 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-210ENST00000590061 FERMT2Q96AC1 680 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 RTEL1Q9NZ71 1219 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 VPS54Q9P1Q0 977 aa8.33□□□□□ -1.08
SMAD4-210ENST00000590061 ABT1Q9ULW3 272 aaKnown RBP8.33□□□□□ -1.08
SMAD4-210ENST00000590061 CCL15-CCL14A0A0B4J2E2 113 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 SLC26A4O43511 780 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 STRNO43815 780 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 TRAK2O60296 914 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 BAG4O95429 457 aaKnown RBP8.32□□□□□ -1.08
SMAD4-210ENST00000590061 GHRHRQ02643 423 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 MCM6Q14566 821 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 CCL15Q16663 113 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 CST9Q5W186 159 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 ARL6IP4Q66PJ3 421 aaKnown RBP8.32□□□□□ -1.08
SMAD4-210ENST00000590061 TTBK2Q6IQ55 1244 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 CMTR1Q8N1G2 835 aaKnown RBP8.32□□□□□ -1.08
SMAD4-210ENST00000590061 GPRC5AQ8NFJ5 357 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 CLMNQ96JQ2 1002 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 SPATA32Q96LK8 384 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 NUP88Q99567 741 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-210ENST00000590061 ACAD9Q9H845 621 aa8.32□□□□□ -1.08
SMAD4-210ENST00000590061 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-210ENST00000590061 ADD3Q9UEY8 706 aaKnown RBP8.32□□□□□ -1.08
SMAD4-210ENST00000590061 BTBD18B2RXH4 712 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 MAFGO15525 162 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 PPP6R2O75170 966 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 MAP2K2P36507 400 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 HERVK_113P62684 666 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 RESTQ13127 1097 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 STK38Q15208 465 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 ANO1Q5XXA6 986 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 PPP4R3AQ6IN85 833 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 NEK8Q86SG6 692 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 RIOX2Q8IUF8 465 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 SLFN12Q8IYM2 578 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 TNS4Q8IZW8 715 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 ABRAQ8N0Z2 381 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 KCTD17Q8N5Z5 321 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 CCDC155Q8N6L0 562 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 TMEM87AQ8NBN3 555 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 DNERQ8NFT8 737 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 PIBF1Q8WXW3 757 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 NANOS1Q8WY41 292 aaKnown RBP8.31□□□□□ -1.08
SMAD4-210ENST00000590061 CDHR1Q96JP9 859 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 IWS1Q96ST2 819 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 ASCC2Q9H1I8 757 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-210ENST00000590061 ZFYVE28Q9HCC9 887 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 HOOK1Q9UJC3 728 aaKnown RBP8.31□□□□□ -1.08
SMAD4-210ENST00000590061 RCOR1Q9UKL0 485 aa8.31□□□□□ -1.08
SMAD4-210ENST00000590061 PDHXO00330 501 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 TBX3O15119 743 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 MARCH6O60337 910 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 SLURP2P0DP57 97 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 MAPK4P31152 587 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 MCM4P33991 863 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 TXLNAP40222 546 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 PRPHP41219 470 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 NASPP49321 788 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-210ENST00000590061 UBE2HP62256 183 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 SETQ01105 290 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-210ENST00000590061 KRT76Q01546 638 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 GUCY1B3Q02153 619 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 KCTD2Q14681 263 aa8.3□□□□□ -1.08
SMAD4-210ENST00000590061 SLC39A14Q15043 492 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms