RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 SMCR8Q8TEV9 937 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-219ENST00000589349 OSBPL5Q9H0X9 879 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-219ENST00000589349 ZNF576Q9H609 170 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 ZFYVE1Q9HBF4 777 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 ABCB6Q9NP58 842 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 ZBTB40Q9NUA8 1239 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 PALD1Q9ULE6 856 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 ANKRD33BA6NCL7 494 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-219ENST00000589349 MAP4K4O95819 1239 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-219ENST00000589349 P4HBP07237 508 aaKnown RBP9.93□□□□□ -0.82
DNMT1-219ENST00000589349 NOS3P29474 1203 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 PDE3AQ14432 1141 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.93□□□□□ -0.82
DNMT1-219ENST00000589349 FASTKD5Q7L8L6 764 aaKnown RBP9.93□□□□□ -0.82
DNMT1-219ENST00000589349 ZNF384Q8TF68 577 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 PARK7Q99497 189 aaKnown RBP9.93□□□□□ -0.82
DNMT1-219ENST00000589349 DHX36Q9H2U1 1008 aaKnown RBP9.93□□□□□ -0.82
DNMT1-219ENST00000589349 BOLA2Q9H3K6 86 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 ANTXR1Q9H6X2 564 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 KCNK4Q9NYG8 393 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.93□□□□□ -0.82
DNMT1-219ENST00000589349 PI4KBQ9UBF8 816 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 ZNF112Q9UJU3 913 aa9.93□□□□□ -0.82
DNMT1-219ENST00000589349 CXCL11O14625 94 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 TLR2O60603 784 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 CYP2C8P10632 490 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 XRCC5P13010 732 aaKnown RBP9.92□□□□□ -0.82
DNMT1-219ENST00000589349 NLRP12P59046 1061 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 SPP2Q13103 211 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 RPS26P11Q5JNZ5 115 aaPredicted RBP9.92□□□□□ -0.82
DNMT1-219ENST00000589349 NOL9Q5SY16 702 aaKnown RBP9.92□□□□□ -0.82
DNMT1-219ENST00000589349 SLC9C2Q5TAH2 1124 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 ANKRD23Q86SG2 305 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 ADGRA1Q86SQ6 560 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 NBPF11Q86T75 865 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 FOXD4L4Q8WXT5 416 aaPredicted RBP9.92□□□□□ -0.82
DNMT1-219ENST00000589349 ZNF512BQ96KM6 892 aaPredicted RBP9.92□□□□□ -0.82
DNMT1-219ENST00000589349 BCO2Q9BYV7 579 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 LRRCC1Q9C099 1032 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 AS3MTQ9HBK9 375 aa9.92□□□□□ -0.82
DNMT1-219ENST00000589349 FLT1P17948 1338 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 DDX3YO15523 660 aaKnown RBP9.91□□□□□ -0.82
DNMT1-219ENST00000589349 ADAM11O75078 769 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 WISP1O95388 367 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 HOXD10P28358 340 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 PSMC4P43686 418 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 DOC2BQ14184 412 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 SLC9C1Q4G0N8 1177 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 SIRT2Q8IXJ6 389 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 GLIS3Q8NEA6 775 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 RAET1EQ8TD07 263 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 GPATCH3Q96I76 525 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.91□□□□□ -0.82
DNMT1-219ENST00000589349 TPSG1Q9NRR2 321 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 TMOD4Q9NZQ9 345 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 HERC5Q9UII4 1024 aaKnown RBP9.91□□□□□ -0.82
DNMT1-219ENST00000589349 PTPN22Q9Y2R2 807 aa9.91□□□□□ -0.82
DNMT1-219ENST00000589349 MPHOSPH10O00566 681 aaKnown RBP9.9□□□□□ -0.82
DNMT1-219ENST00000589349 GIPC1O14908 333 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 CAP2P40123 477 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 GSTM4Q03013 218 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 RAB3GAP1Q15042 981 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 DTHD1Q6ZMT9 781 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 TTC6Q86TZ1 520 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 CERS3Q8IU89 383 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 FOXP4Q8IVH2 680 aaPredicted RBP9.9□□□□□ -0.82
DNMT1-219ENST00000589349 CCAR1Q8IX12 1150 aaKnown RBP9.9□□□□□ -0.82
DNMT1-219ENST00000589349 AMOTL1Q8IY63 956 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 UBASH3BQ8TF42 649 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 EDC3Q96F86 508 aaKnown RBP9.9□□□□□ -0.82
DNMT1-219ENST00000589349 FEZ1Q99689 392 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 CEP41Q9BYV8 373 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 CRNKL1Q9BZJ0 848 aaKnown RBP9.9□□□□□ -0.82
DNMT1-219ENST00000589349 ARHGAP39Q9C0H5 1083 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 CWC22Q9HCG8 908 aaKnown RBP9.9□□□□□ -0.82
DNMT1-219ENST00000589349 ZCCHC17Q9NP64 241 aaKnown RBP9.9□□□□□ -0.82
DNMT1-219ENST00000589349 PAG1Q9NWQ8 432 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 MCM9Q9NXL9 1143 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 AFG3L2Q9Y4W6 797 aa9.9□□□□□ -0.82
DNMT1-219ENST00000589349 OTOFQ9HC10 1997 aa9.9□□□□□ -0.83
DNMT1-219ENST00000589349 ZNF532Q9HCE3 1301 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 B3GALT4O96024 378 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 PDE6AP16499 860 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 ERCC3P19447 782 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 HMGCS2P54868 508 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 FCGRTP55899 365 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 IRX3P78415 501 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-219ENST00000589349 LACTBP83111 547 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-219ENST00000589349 PABPC4Q13310 644 aaKnown RBP eCLIP9.89□□□□□ -0.83
DNMT1-219ENST00000589349 ZYXQ15942 572 aaKnown RBP9.89□□□□□ -0.83
DNMT1-219ENST00000589349 ZNF423Q2M1K9 1284 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 HGSNATQ68CP4 663 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 Q6ZS46 218 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 FRMD6Q96NE9 622 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 CABP5Q9NP86 173 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 PTCH2Q9Y6C5 1203 aa9.89□□□□□ -0.83
DNMT1-219ENST00000589349 A0A0G2JLL6 359 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-219ENST00000589349 ALX3O95076 343 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms