RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 CCT2P78371 535 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 TOB2Q14106 344 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 ANO3Q9BYT9 981 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 C22orf23Q9BZE7 217 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 SH3GLB2Q9NR46 395 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 GBF1Q92538 1859 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.27
PRKCSH-207ENST00000588269 B4GALT4O60513 344 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 DEXIO95424 95 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 PFKMP08237 780 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 HOXD8P13378 290 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 CYP2C18P33260 490 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 ZNF76P36508 570 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 MRPS9P82933 396 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 SETQ01105 290 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 BFSP2Q13515 415 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 NBPF20Q3BBV1 942 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 TMEM240Q5SV17 173 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 SESTD1Q86VW0 696 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 WASF1Q92558 559 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 PHKBQ93100 1093 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 SDF4Q9BRK5 362 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 PBX4Q9BYU1 374 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 ZNF576Q9H609 170 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 RTEL1Q9NZ71 1219 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 CUL9Q8IWT3 2517 aa13.39□□□□□ -0.27
PRKCSH-207ENST00000588269 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 ZNF286BP0CG31 522 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 GNAT1P11488 350 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 SREBF1P36956 1147 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 PSEN2P49810 448 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 MFSD10Q14728 455 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 GALNT17Q6IS24 598 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 ZNF365Q70YC5 407 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 RETREG2Q8NC44 543 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 CAGE1Q8TC20 777 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 TNPO1Q92973 898 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 TIFAQ96CG3 184 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 IL17RAQ96F46 866 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 NCOA5Q9HCD5 579 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 JADE2Q9NQC1 790 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 CXXC1Q9P0U4 656 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 STK36Q9NRP7 1315 aa13.38□□□□□ -0.27
PRKCSH-207ENST00000588269 VCANP13611 3396 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 PARNO95453 639 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 RFC2P35250 354 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 NLRP5P59047 1200 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 STK3Q13188 491 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 PTGISQ16647 500 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 KIAA0753Q2KHM9 967 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 HSDL1Q3SXM5 330 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 CEP55Q53EZ4 464 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 TYW1BQ6NUM6 668 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 CYFIP1Q7L576 1253 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 RPUSD2Q8IZ73 545 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 PPP1R13LQ8WUF5 828 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 NOC4LQ9BVI4 516 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 PRDM12Q9H4Q4 367 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 JPH1Q9HDC5 661 aaPredicted RBP13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 TRMT13Q9NUP7 481 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 UBIAD1Q9Y5Z9 338 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 GRIN2DO15399 1336 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 MYO9BQ13459 2157 aa13.37□□□□□ -0.27
PRKCSH-207ENST00000588269 LGALS2P05162 132 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 CLK2P49760 499 aaKnown RBP13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 ARHGAP4P98171 946 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 SP4Q02446 784 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 ADGRE1Q14246 886 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 CCDC85BQ15834 202 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 NTRK3Q16288 839 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 IL27Q8NEV9 243 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 MXRA8Q9BRK3 442 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 ALG1Q9BT22 464 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 AZI2Q9H6S1 392 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 BRMS1Q9HCU9 246 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 GTF2IRD1Q9UHL9 959 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 RAPGEFL1Q9UHV5 662 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 NFASCO94856 1347 aa13.36□□□□□ -0.27
PRKCSH-207ENST00000588269 TMEM265A0A087WTH1 108 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 H3BRB1 525 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 SORBS3O60504 671 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 PFKFB2O60825 505 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 ACTN1P12814 892 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 KCNA2P16389 499 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 ITGB5P18084 799 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 AK2P54819 239 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 CCL23P55773 120 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 SP2Q02086 613 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 PKN1Q16512 942 aa13.35□□□□□ -0.27
PRKCSH-207ENST00000588269 JAKMIP3Q5VZ66 844 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms