RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TMEM74Q96NL1 305 aa6.41□□□□□ -1.38
ZNF540-204ENST00000586792 TSC22D4Q9Y3Q8 395 aa6.41□□□□□ -1.38
ZNF540-204ENST00000586792 ABCA3Q99758 1704 aa6.41□□□□□ -1.38
ZNF540-204ENST00000586792 TRPM3Q9HCF6 1732 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-204ENST00000586792 USP31Q70CQ4 1352 aa6.41□□□□□ -1.38
ZNF540-204ENST00000586792 ALS2Q96Q42 1657 aa6.4□□□□□ -1.38
ZNF540-204ENST00000586792 GBP2P32456 591 aaPredicted RBP6.4□□□□□ -1.38
ZNF540-204ENST00000586792 CRB2Q5IJ48 1285 aa6.4□□□□□ -1.38
ZNF540-204ENST00000586792 SNAP47Q5SQN1 464 aa6.4□□□□□ -1.38
ZNF540-204ENST00000586792 SPRED1Q7Z699 444 aa6.4□□□□□ -1.38
ZNF540-204ENST00000586792 FAM124AQ86V42 546 aa6.4□□□□□ -1.38
ZNF540-204ENST00000586792 LGI4Q8N135 537 aa6.4□□□□□ -1.38
ZNF540-204ENST00000586792 Q8N1X5 172 aa6.4□□□□□ -1.38
ZNF540-204ENST00000586792 CDK5RAP1Q96SZ6 601 aaKnown RBP6.4□□□□□ -1.38
ZNF540-204ENST00000586792 DUSP9Q99956 384 aaKnown RBP6.4□□□□□ -1.38
ZNF540-204ENST00000586792 MKRN2Q9H000 416 aaKnown RBP6.4□□□□□ -1.38
ZNF540-204ENST00000586792 GZF1Q9H116 711 aaPredicted RBP6.4□□□□□ -1.38
ZNF540-204ENST00000586792 PLCH1Q4KWH8 1693 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 GSTM1P09488 218 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 MC3RP41968 323 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 CWF19L2Q2TBE0 894 aaKnown RBP6.39□□□□□ -1.39
ZNF540-204ENST00000586792 NBPF8Q3BBV2 869 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 RTP2Q5QGT7 225 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 CWF19L1Q69YN2 538 aaKnown RBP6.39□□□□□ -1.39
ZNF540-204ENST00000586792 BORAQ6PGQ7 559 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 CRTC3Q6UUV7 619 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 USP48Q86UV5 1035 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 GOLM1Q8NBJ4 401 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 ADAMTS17Q8TE56 1095 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 ZNF512BQ96KM6 892 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-204ENST00000586792 RSRP1Q9BUV0 290 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 DSCC1Q9BVC3 393 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 RGS17Q9UGC6 210 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-204ENST00000586792 PLA2G2DQ9UNK4 145 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 ACEP12821 1306 aa6.39□□□□□ -1.39
ZNF540-204ENST00000586792 PHRF1Q9P1Y6 1649 aaKnown RBP6.39□□□□□ -1.39
ZNF540-204ENST00000586792 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.39□□□□□ -1.39
ZNF540-204ENST00000586792 SMARCA5O60264 1052 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-204ENST00000586792 ATE1O95260 518 aa6.38□□□□□ -1.39
ZNF540-204ENST00000586792 RBM6P78332 1123 aaKnown RBP6.38□□□□□ -1.39
ZNF540-204ENST00000586792 NLGN2Q8NFZ4 835 aa6.38□□□□□ -1.39
ZNF540-204ENST00000586792 CPA5Q8WXQ8 436 aa6.38□□□□□ -1.39
ZNF540-204ENST00000586792 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
ZNF540-204ENST00000586792 SPATA6Q9NWH7 488 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-204ENST00000586792 TRPC5Q9UL62 973 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-204ENST00000586792 ZNF536O15090 1300 aa6.38□□□□□ -1.39
ZNF540-204ENST00000586792 POLR3AO14802 1390 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-204ENST00000586792 BRD4O60885 1362 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-204ENST00000586792 SBNO2Q9Y2G9 1366 aa6.38□□□□□ -1.39
ZNF540-204ENST00000586792 CDK12Q9NYV4 1490 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-204ENST00000586792 NWD2Q9ULI1 1742 aa6.38□□□□□ -1.39
ZNF540-204ENST00000586792 COL14A1Q05707 1796 aaKnown RBP6.38□□□□□ -1.39
ZNF540-204ENST00000586792 F6X3S4 739 aa6.37□□□□□ -1.39
ZNF540-204ENST00000586792 POLR2BP30876 1174 aaKnown RBP6.37□□□□□ -1.39
ZNF540-204ENST00000586792 NOP2P46087 812 aaKnown RBP6.37□□□□□ -1.39
ZNF540-204ENST00000586792 AUHQ13825 339 aaKnown RBP6.37□□□□□ -1.39
ZNF540-204ENST00000586792 FAM196AQ6ZSG2 479 aa6.37□□□□□ -1.39
ZNF540-204ENST00000586792 CABP7Q86V35 215 aa6.37□□□□□ -1.39
ZNF540-204ENST00000586792 ST6GALNAC2Q9UJ37 374 aa6.37□□□□□ -1.39
ZNF540-204ENST00000586792 PCDHB14Q9Y5E9 798 aa6.37□□□□□ -1.39
ZNF540-204ENST00000586792 AKAP12Q02952 1782 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 CRYBG1Q9Y4K1 1723 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 USP6P35125 1406 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 USP47Q96K76 1375 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 SLC9A5Q14940 896 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 OVOS1Q6IE37 1185 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 NLRC3Q7RTR2 1065 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 HDGFL2Q7Z4V5 671 aaPredicted RBP6.36□□□□□ -1.39
ZNF540-204ENST00000586792 SMARCC2Q8TAQ2 1214 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 ZBTB8AQ96BR9 441 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 TSPAN17Q96FV3 270 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 SLC12A9Q9BXP2 914 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 VPS11Q9H270 941 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 PRDM11Q9NQV5 511 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 INVSQ9Y283 1065 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 MON2Q7Z3U7 1717 aa6.36□□□□□ -1.39
ZNF540-204ENST00000586792 NRKQ7Z2Y5 1582 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 SLIT2O94813 1529 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 KTN1Q86UP2 1357 aaKnown RBP6.35□□□□□ -1.39
ZNF540-204ENST00000586792 NINLQ9Y2I6 1382 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 PATL2C9JE40 543 aaKnown RBP6.35□□□□□ -1.39
ZNF540-204ENST00000586792 TBC1D8O95759 1140 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 PMLP29590 882 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 TMF1P82094 1093 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 FAM160A1Q05DH4 1040 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 CACNB2Q08289 660 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-204ENST00000586792 SURF1Q15526 300 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 UNC5CLQ8IV45 518 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 ZNF428Q96B54 188 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 ATG4CQ96DT6 458 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 NOX5Q96PH1 765 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 SSBP3Q9BWW4 388 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-204ENST00000586792 SRRTQ9BXP5 876 aaKnown RBP6.35□□□□□ -1.39
ZNF540-204ENST00000586792 PCED1AQ9H1Q7 454 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 PCDH18Q9HCL0 1135 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 TERF2IPQ9NYB0 399 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 NUDT5Q9UKK9 219 aa6.35□□□□□ -1.39
ZNF540-204ENST00000586792 RGS12O14924 1447 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 ATRNO75882 1429 aa6.34□□□□□ -1.39
ZNF540-204ENST00000586792 NRAPQ86VF7 1730 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms