RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ARHGEF16Q5VV41 709 aa14.1□□□□□ -0.15
RNF43-208ENST00000584437 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
RNF43-208ENST00000584437 ASXL2Q76L83 1435 aa14.1□□□□□ -0.15
RNF43-208ENST00000584437 EEF1DP29692 281 aaKnown RBP14.1□□□□□ -0.15
RNF43-208ENST00000584437 TCP10Q12799 353 aa14.1□□□□□ -0.15
RNF43-208ENST00000584437 MED10Q9BTT4 135 aa14.1□□□□□ -0.15
RNF43-208ENST00000584437 UPF3AQ9H1J1 476 aaKnown RBP14.1□□□□□ -0.15
RNF43-208ENST00000584437 TLK1Q9UKI8 766 aa14.1□□□□□ -0.15
RNF43-208ENST00000584437 GFPT2O94808 682 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 KMT5BQ4FZB7 885 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 MFSD14BQ5SR56 506 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 FAM96AQ9H5X1 160 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 PCDHA1Q9Y5I3 950 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 PRPF3O43395 683 aaKnown RBP14.09□□□□□ -0.15
RNF43-208ENST00000584437 S100BP04271 92 aaPredicted RBP14.09□□□□□ -0.15
RNF43-208ENST00000584437 PDE6BP35913 854 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 PIP4K2CQ8TBX8 421 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 ZC3H15Q8WU90 426 aaKnown RBP14.09□□□□□ -0.15
RNF43-208ENST00000584437 TRIM55Q9BYV6 548 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 GMNCA6NCL1 334 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 PDE8BO95263 885 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 GYS2P54840 703 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 CYP4A11Q02928 519 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 PABPC4Q13310 644 aaKnown RBP eCLIP14.09□□□□□ -0.15
RNF43-208ENST00000584437 GRAMD1BQ3KR37 738 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 ALKBH5Q6P6C2 394 aaKnown RBP14.09□□□□□ -0.15
RNF43-208ENST00000584437 ESYT2A0FGR8 921 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 CFAP73A6NFT4 308 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 MIF4GDA9UHW6 222 aaKnown RBP14.09□□□□□ -0.15
RNF43-208ENST00000584437 TOM1L1O75674 476 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 TMOD1P28289 359 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 PDIK1LQ8N165 341 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 AMNQ9BXJ7 453 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 CCNL1Q9UK58 526 aaPredicted RBP14.09□□□□□ -0.15
RNF43-208ENST00000584437 GGCXP38435 758 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 LIFRP42702 1097 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 RWDD2BP57060 319 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 NECTIN1Q15223 517 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 RESP18Q5W5W9 173 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 SRRM1Q8IYB3 904 aaKnown RBP14.09□□□□□ -0.15
RNF43-208ENST00000584437 LRRC47Q8N1G4 583 aaKnown RBP14.09□□□□□ -0.15
RNF43-208ENST00000584437 ARHGAP18Q8N392 663 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 SMYD2Q9NRG4 433 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 NUB1Q9Y5A7 615 aa14.09□□□□□ -0.15
RNF43-208ENST00000584437 BCAMP50895 628 aa14.08□□□□□ -0.15
RNF43-208ENST00000584437 LRRC41Q15345 812 aa14.08□□□□□ -0.15
RNF43-208ENST00000584437 AP1M1Q9BXS5 423 aa14.08□□□□□ -0.15
RNF43-208ENST00000584437 EMILIN3Q9NT22 766 aa14.08□□□□□ -0.15
RNF43-208ENST00000584437 HNRNPDLO14979 420 aaKnown RBP14.08□□□□□ -0.16
RNF43-208ENST00000584437 CHGBP05060 677 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 NT5C2P49902 561 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 ZC3H18Q86VM9 953 aaKnown RBP14.08□□□□□ -0.16
RNF43-208ENST00000584437 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
RNF43-208ENST00000584437 ATP10DQ9P241 1426 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 GYG2O15488 501 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 LARGE1O95461 756 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 TOGARAM2Q6ZUX3 1019 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 EEF1B2P24534 225 aaKnown RBP14.08□□□□□ -0.16
RNF43-208ENST00000584437 BASP1P80723 227 aaKnown RBP14.08□□□□□ -0.16
RNF43-208ENST00000584437 CAV1Q03135 178 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 ITKQ08881 620 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 DNAJC24Q6P3W2 148 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 TRIM15Q9C019 465 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 NRBP2Q9NSY0 501 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 ABHD10Q9NUJ1 306 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 SYNGAP1Q96PV0 1343 aa14.08□□□□□ -0.16
RNF43-208ENST00000584437 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 OATP04181 439 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 PLS3P13797 630 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 GYG1P46976 350 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 SLFN13Q68D06 897 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 CLEC17AQ6ZS10 378 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 CRLF3Q8IUI8 442 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 PYGBP11216 843 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 POLGP54098 1239 aaPredicted RBP14.07□□□□□ -0.16
RNF43-208ENST00000584437 MDM2Q00987 491 aaPredicted RBP14.07□□□□□ -0.16
RNF43-208ENST00000584437 NR5A1Q13285 461 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 ARID5BQ14865 1188 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 PYROXD1Q8WU10 500 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 MAML1Q92585 1016 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 CCDC17Q96LX7 622 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 MLXIPQ9HAP2 919 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
RNF43-208ENST00000584437 M0R2C6 588 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 LRRN2O75325 713 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 FGGP02679 453 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 PPP2R2AP63151 447 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 IL1RL1Q01638 556 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 PCGF5Q86SE9 256 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 WDR75Q8IWA0 830 aaKnown RBP14.07□□□□□ -0.16
RNF43-208ENST00000584437 ZNF579Q8NAF0 562 aaKnown RBP14.07□□□□□ -0.16
RNF43-208ENST00000584437 NACC1Q96RE7 527 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 LGALS16A8MUM7 142 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 ICA1Q05084 483 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 CERKLQ49MI3 558 aaPredicted RBP14.07□□□□□ -0.16
RNF43-208ENST00000584437 RUBCNQ92622 972 aa14.07□□□□□ -0.16
RNF43-208ENST00000584437 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.07□□□□□ -0.161e-5■□□□□ 9.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms