RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 FAM178BQ8IXR5 827 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 CHURC1Q8WUH1 139 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 COPS5Q92905 334 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 CTAGE1Q96RT6 745 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 PRR12Q9ULL5 1215 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.5■□□□□ 0.87
SNX11-212ENST00000583320 BAIAP3O94812 1187 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 FDPSP14324 419 aaKnown RBP20.5■□□□□ 0.87
SNX11-212ENST00000583320 IL9P15248 144 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 MRE11P49959 708 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 CPT1AP50416 773 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 BAATQ14032 418 aaPredicted RBP20.5■□□□□ 0.87
SNX11-212ENST00000583320 GJD3Q8N144 294 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 RETREG2Q8NC44 543 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.5■□□□□ 0.87
SNX11-212ENST00000583320 LZTS2Q9BRK4 669 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 SUGCTQ9HAC7 445 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 ORC3Q9UBD5 711 aaPredicted RBP20.5■□□□□ 0.87
SNX11-212ENST00000583320 CCPG1Q9ULG6 757 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 ZDHHC9Q9Y397 364 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 SIP14410 1827 aa20.5■□□□□ 0.87
SNX11-212ENST00000583320 NFIBO00712 420 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 PLA2G6O60733 806 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 SMARCA1P28370 1054 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 SSRP1Q08945 709 aaKnown RBP20.49■□□□□ 0.87
SNX11-212ENST00000583320 NFRKBQ6P4R8 1299 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 CLEC17AQ6ZS10 378 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 TMTC3Q6ZXV5 915 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 TRIM22Q8IYM9 498 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 WASF1Q92558 559 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 RNF26Q9BY78 433 aaPredicted RBP20.49■□□□□ 0.87
SNX11-212ENST00000583320 LMCD1Q9NZU5 365 aa20.49■□□□□ 0.87
SNX11-212ENST00000583320 KCNA5P22460 613 aa20.48■□□□□ 0.87
SNX11-212ENST00000583320 KCNJ6P48051 423 aa20.48■□□□□ 0.87
SNX11-212ENST00000583320 PKP1Q13835 747 aa20.48■□□□□ 0.87
SNX11-212ENST00000583320 LEXMQ3ZCV2 418 aa20.48■□□□□ 0.87
SNX11-212ENST00000583320 SLC30A10Q6XR72 485 aa20.48■□□□□ 0.87
SNX11-212ENST00000583320 MTMR6Q9Y217 621 aa20.48■□□□□ 0.87
SNX11-212ENST00000583320 MYH6P13533 1939 aa20.48■□□□□ 0.87
SNX11-212ENST00000583320 PALM3A6NDB9 673 aaPredicted RBP20.47■□□□□ 0.87
SNX11-212ENST00000583320 ICAM1P05362 532 aa20.47■□□□□ 0.87
SNX11-212ENST00000583320 SNHG28P0DPA3 235 aa20.47■□□□□ 0.87
SNX11-212ENST00000583320 ZSCAN22P10073 491 aaPredicted RBP20.47■□□□□ 0.87
SNX11-212ENST00000583320 NHLH1Q02575 133 aa20.47■□□□□ 0.87
SNX11-212ENST00000583320 FUT2Q10981 343 aa20.47■□□□□ 0.87
SNX11-212ENST00000583320 BFSP2Q13515 415 aa20.47■□□□□ 0.87
SNX11-212ENST00000583320 DHX38Q92620 1227 aaKnown RBP20.47■□□□□ 0.87
SNX11-212ENST00000583320 TNPO1Q92973 898 aaKnown RBP20.47■□□□□ 0.87
SNX11-212ENST00000583320 UIMC1Q96RL1 719 aa20.47■□□□□ 0.87
SNX11-212ENST00000583320 ZNF318Q5VUA4 2279 aa20.47■□□□□ 0.87
SNX11-212ENST00000583320 LINC01553A4QN01 128 aa20.46■□□□□ 0.87
SNX11-212ENST00000583320 A6NJR5 290 aa20.46■□□□□ 0.87
SNX11-212ENST00000583320 PRPF3O43395 683 aaKnown RBP20.46■□□□□ 0.87
SNX11-212ENST00000583320 DEXIO95424 95 aa20.46■□□□□ 0.87
SNX11-212ENST00000583320 SSTR3P32745 418 aaPredicted RBP20.46■□□□□ 0.87
SNX11-212ENST00000583320 CHMP4BP1P59074 171 aa20.46■□□□□ 0.87
SNX11-212ENST00000583320 ERVK-21P61565 698 aa20.46■□□□□ 0.87
SNX11-212ENST00000583320 ASPRV1Q53RT3 343 aa20.46■□□□□ 0.87
SNX11-212ENST00000583320 MAD2L2Q9UI95 211 aa20.46■□□□□ 0.87
SNX11-212ENST00000583320 MTMR7Q9Y216 660 aa20.46■□□□□ 0.87
SNX11-212ENST00000583320 NBNO60934 754 aa20.45■□□□□ 0.86
SNX11-212ENST00000583320 ARIH2O95376 493 aa20.45■□□□□ 0.86
SNX11-212ENST00000583320 PARP1P09874 1014 aaKnown RBP20.45■□□□□ 0.86
SNX11-212ENST00000583320 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
SNX11-212ENST00000583320 PTPN11Q06124 597 aaPredicted RBP20.45■□□□□ 0.86
SNX11-212ENST00000583320 TTBK2Q6IQ55 1244 aa20.45■□□□□ 0.86
SNX11-212ENST00000583320 ZBED2Q9BTP6 218 aa20.45■□□□□ 0.86
SNX11-212ENST00000583320 SLC26A6Q9BXS9 759 aa20.45■□□□□ 0.86
SNX11-212ENST00000583320 RANBP17Q9H2T7 1088 aaKnown RBP20.45■□□□□ 0.86
SNX11-212ENST00000583320 ADD3Q9UEY8 706 aaKnown RBP20.45■□□□□ 0.86
SNX11-212ENST00000583320 NOD1Q9Y239 953 aa20.45■□□□□ 0.86
SNX11-212ENST00000583320 C5orf42Q9H799 3197 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 H3BQV1 296 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 GJB5O95377 273 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 PDHBP11177 359 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 SLC16A2P36021 539 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 PTGISQ16647 500 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 PTCRAQ6ISU1 281 aaPredicted RBP20.44■□□□□ 0.86
SNX11-212ENST00000583320 GDF6Q6KF10 455 aaPredicted RBP20.44■□□□□ 0.86
SNX11-212ENST00000583320 AFAP1L1Q8TED9 768 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 PHKBQ93100 1093 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 FBXL18Q96ME1 805 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 GBP4Q96PP9 640 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 TGS1Q96RS0 853 aaKnown RBP20.44■□□□□ 0.86
SNX11-212ENST00000583320 ATP6V1DQ9Y5K8 247 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 CNTNAP5Q8WYK1 1306 aa20.44■□□□□ 0.86
SNX11-212ENST00000583320 VPS37CA5D8V6 355 aaPredicted RBP20.43■□□□□ 0.86
SNX11-212ENST00000583320 PLEKHA8P1O95397 391 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 F13A1P00488 732 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 CALML3P27482 149 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 GPATCH4Q5T3I0 446 aaKnown RBP20.43■□□□□ 0.86
SNX11-212ENST00000583320 FAM117BQ6P1L5 589 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 LRRC8DQ7L1W4 858 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 SRBD1Q8N5C6 995 aaKnown RBP20.43■□□□□ 0.86
SNX11-212ENST00000583320 FBXO18Q8NFZ0 1043 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 DCAF4Q8WV16 495 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 CLEC4DQ8WXI8 215 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 C8orf76Q96K31 380 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 RAD9AQ99638 391 aa20.43■□□□□ 0.86
SNX11-212ENST00000583320 ALG1Q9BT22 464 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms