RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 PRR16Q569H4 304 aa24.59■■□□□ 1.53
TSEN54-208ENST00000583173 LARP1BQ659C4 914 aaKnown RBP24.59■■□□□ 1.53
TSEN54-208ENST00000583173 PPP4R3AQ6IN85 833 aa24.59■■□□□ 1.53
TSEN54-208ENST00000583173 MLXIPQ9HAP2 919 aa24.59■■□□□ 1.53
TSEN54-208ENST00000583173 NFASCO94856 1347 aa24.59■■□□□ 1.53
TSEN54-208ENST00000583173 MSH4O15457 936 aa24.58■■□□□ 1.53
TSEN54-208ENST00000583173 ZEB2O60315 1214 aa24.58■■□□□ 1.53
TSEN54-208ENST00000583173 KPNA6O60684 536 aa24.58■■□□□ 1.53
TSEN54-208ENST00000583173 PURAQ00577 322 aaKnown RBP24.58■■□□□ 1.53
TSEN54-208ENST00000583173 FERMT2Q96AC1 680 aa24.58■■□□□ 1.53
TSEN54-208ENST00000583173 SPATA33Q96N06 139 aa24.58■■□□□ 1.53
TSEN54-208ENST00000583173 GRIN2DO15399 1336 aa24.58■■□□□ 1.52
TSEN54-208ENST00000583173 ELP1O95163 1332 aa24.58■■□□□ 1.52
TSEN54-208ENST00000583173 DNAH12Q6ZR08 3092 aa24.58■■□□□ 1.52
TSEN54-208ENST00000583173 WNT7AO00755 349 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 SORBS3O60504 671 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 CABYRO75952 493 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 SETQ01105 290 aaPredicted RBP24.57■■□□□ 1.52
TSEN54-208ENST00000583173 SNX17Q15036 470 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 C1orf53Q5VUE5 145 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 CXCL17Q6UXB2 119 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 SLC39A5Q6ZMH5 540 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 SLC43A3Q8NBI5 491 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 KAT2BQ92831 832 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 GPR20Q99678 358 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 POLR3EQ9NVU0 708 aa24.57■■□□□ 1.52
TSEN54-208ENST00000583173 GSTTP1A0A1W2PQM5 241 aa24.56■■□□□ 1.52
TSEN54-208ENST00000583173 CDK7P50613 346 aa24.56■■□□□ 1.52
TSEN54-208ENST00000583173 LETM2Q2VYF4 491 aa24.56■■□□□ 1.52
TSEN54-208ENST00000583173 BRDTQ58F21 947 aaPredicted RBP24.56■■□□□ 1.52
TSEN54-208ENST00000583173 NOSTRINQ8IVI9 506 aa24.56■■□□□ 1.52
TSEN54-208ENST00000583173 SLC5A5Q92911 643 aa24.56■■□□□ 1.52
TSEN54-208ENST00000583173 IPO5O00410 1097 aaKnown RBP24.55■■□□□ 1.52
TSEN54-208ENST00000583173 SLC37A4O43826 429 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 ATG7O95352 703 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 GCFC2P16383 781 aaKnown RBP24.55■■□□□ 1.52
TSEN54-208ENST00000583173 DGKDQ16760 1214 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 LRRC26Q2I0M4 334 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 ETNPPLQ8TBG4 499 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 ZNF577Q9BSK1 485 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 C16orf70Q9BSU1 422 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 MTG1Q9BT17 334 aaPredicted RBP24.55■■□□□ 1.52
TSEN54-208ENST00000583173 FOXD4L1Q9NU39 408 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 PKD2L1Q9P0L9 805 aa24.55■■□□□ 1.52
TSEN54-208ENST00000583173 MYL3P08590 195 aa24.54■■□□□ 1.52
TSEN54-208ENST00000583173 GLT1D1Q96MS3 346 aa24.54■■□□□ 1.52
TSEN54-208ENST00000583173 NAP1L4Q99733 375 aaKnown RBP24.54■■□□□ 1.52
TSEN54-208ENST00000583173 KCNMB3Q9NPA1 279 aa24.54■■□□□ 1.52
TSEN54-208ENST00000583173 TBC1D22BQ9NU19 505 aa24.54■■□□□ 1.52
TSEN54-208ENST00000583173 DDX25Q9UHL0 483 aaKnown RBP24.54■■□□□ 1.52
TSEN54-208ENST00000583173 CCNE2O96020 404 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 SYT1P21579 422 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 TOB1P50616 345 aaPredicted RBP24.53■■□□□ 1.52
TSEN54-208ENST00000583173 B3GNT9Q6UX72 402 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 SEPT1Q8WYJ6 367 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 HAS1Q92839 578 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 UIMC1Q96RL1 719 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 RIT2Q99578 217 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 JPH1Q9HDC5 661 aaPredicted RBP24.53■■□□□ 1.52
TSEN54-208ENST00000583173 STARD7Q9NQZ5 370 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 SLC9A2Q9UBY0 812 aa24.53■■□□□ 1.52
TSEN54-208ENST00000583173 HAS3O00219 553 aa24.52■■□□□ 1.52
TSEN54-208ENST00000583173 CCNT1O60563 726 aaKnown RBP24.52■■□□□ 1.52
TSEN54-208ENST00000583173 PSMD10O75832 226 aa24.52■■□□□ 1.52
TSEN54-208ENST00000583173 PDCP20941 246 aa24.52■■□□□ 1.52
TSEN54-208ENST00000583173 GJA10Q969M2 543 aa24.52■■□□□ 1.52
TSEN54-208ENST00000583173 SDF4Q9BRK5 362 aa24.52■■□□□ 1.52
TSEN54-208ENST00000583173 H3BQV1 296 aa24.51■■□□□ 1.51
TSEN54-208ENST00000583173 ARVCFO00192 962 aa24.51■■□□□ 1.51
TSEN54-208ENST00000583173 TRAPPC10P48553 1259 aa24.51■■□□□ 1.51
TSEN54-208ENST00000583173 ATN1P54259 1190 aaPredicted RBP24.51■■□□□ 1.51
TSEN54-208ENST00000583173 ACTR2P61160 394 aa24.51■■□□□ 1.51
TSEN54-208ENST00000583173 PSMC6P62333 389 aa24.51■■□□□ 1.51
TSEN54-208ENST00000583173 FAM20AQ96MK3 541 aa24.51■■□□□ 1.51
TSEN54-208ENST00000583173 PCYT2Q99447 389 aa24.51■■□□□ 1.51
TSEN54-208ENST00000583173 IGKV6D-21A0A0A0MT36 114 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 TBX3O15119 743 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 LGR5O75473 907 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 F2P00734 622 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 LGALS2P05162 132 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 ITGA7Q13683 1181 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 ABHD15Q6UXT9 468 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 MTMR9Q96QG7 549 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 HTATIP2Q9BUP3 242 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 SEZ6LQ9BYH1 1024 aa24.5■■□□□ 1.51
TSEN54-208ENST00000583173 TNRC18O15417 2968 aaPredicted RBP24.49■■□□□ 1.51
TSEN54-208ENST00000583173 A0A0U1RQG5 324 aaPredicted RBP24.49■■□□□ 1.51
TSEN54-208ENST00000583173 NOP56O00567 594 aaKnown RBP24.49■■□□□ 1.51
TSEN54-208ENST00000583173 NBPF20Q3BBV1 942 aa24.49■■□□□ 1.51
TSEN54-208ENST00000583173 ZNF746Q6NUN9 644 aaPredicted RBP24.49■■□□□ 1.51
TSEN54-208ENST00000583173 ANKRD33Q7Z3H0 272 aa24.49■■□□□ 1.51
TSEN54-208ENST00000583173 C4orf32Q8N8J7 132 aa24.49■■□□□ 1.51
TSEN54-208ENST00000583173 VTI1AQ96AJ9 217 aa24.49■■□□□ 1.51
TSEN54-208ENST00000583173 MTMR6Q9Y217 621 aa24.49■■□□□ 1.51
TSEN54-208ENST00000583173 SCN10AQ9Y5Y9 1956 aa24.49■■□□□ 1.51
TSEN54-208ENST00000583173 TCF7P36402 384 aaPredicted RBP24.48■■□□□ 1.51
TSEN54-208ENST00000583173 RTP1P59025 263 aa24.48■■□□□ 1.51
TSEN54-208ENST00000583173 SP4Q02446 784 aa24.48■■□□□ 1.51
TSEN54-208ENST00000583173 MLLT1Q03111 559 aaPredicted RBP24.48■■□□□ 1.51
TSEN54-208ENST00000583173 MCTP1Q6DN14 999 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms