RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CENPPQ6IPU0 288 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 IRF2BP1Q8IU81 584 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 PRPF38AQ8NAV1 312 aaKnown RBP25.22■■□□□ 1.63
CCDC47-204ENST00000582252 DUSP9Q99956 384 aaKnown RBP25.22■■□□□ 1.63
CCDC47-204ENST00000582252 ZHX2Q9Y6X8 837 aa25.22■■□□□ 1.63
CCDC47-204ENST00000582252 A0A1W2PQC6 194 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 POTEB3A0JP26 581 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 MFAP3LO75121 409 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 KIF20AO95235 890 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 RPA1P27694 616 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 BACE1P56817 501 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 LRRC63Q05C16 580 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 RBL2Q08999 1139 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 SPIRE1Q08AE8 756 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 GOLGA8FQ08AF8 430 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 GOLGA8DPQ0D2H9 430 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 MTMR2Q13614 643 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 ANKRD40Q6AI12 368 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 POTEBQ6S5H4 581 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 KIF18AQ8NI77 898 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 TSG101Q99816 390 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 SLF1Q9BQI6 1058 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 TRPM7Q96QT4 1865 aa25.21■■□□□ 1.63
CCDC47-204ENST00000582252 MSH4O15457 936 aa25.2■■□□□ 1.63
CCDC47-204ENST00000582252 ICAM1P05362 532 aa25.2■■□□□ 1.63
CCDC47-204ENST00000582252 SSBP05455 408 aaKnown RBP eCLIP25.2■■□□□ 1.63
CCDC47-204ENST00000582252 DNM2P50570 870 aa25.2■■□□□ 1.63
CCDC47-204ENST00000582252 EHHADHQ08426 723 aa25.2■■□□□ 1.63
CCDC47-204ENST00000582252 C19orf81C9J6K1 198 aa25.2■■□□□ 1.62
CCDC47-204ENST00000582252 TAL1P17542 331 aaPredicted RBP25.2■■□□□ 1.62
CCDC47-204ENST00000582252 DNAJC19Q96DA6 116 aa25.2■■□□□ 1.62
CCDC47-204ENST00000582252 PANK4Q9NVE7 773 aa25.2■■□□□ 1.62
CCDC47-204ENST00000582252 CCPG1Q9ULG6 757 aa25.2■■□□□ 1.62
CCDC47-204ENST00000582252 DNM3Q9UQ16 869 aa25.2■■□□□ 1.62
CCDC47-204ENST00000582252 E9PMD0 336 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 TRAF5O00463 557 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 MED24O75448 989 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 STAT3P40763 770 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 SETQ01105 290 aaPredicted RBP25.19■■□□□ 1.62
CCDC47-204ENST00000582252 COASYQ13057 564 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 GPBP1Q86WP2 473 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 MCF2L2Q86YR7 1114 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 SAMD3Q8N6K7 520 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 ZNF592Q92610 1267 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 CNOT6LQ96LI5 555 aaKnown RBP25.19■■□□□ 1.62
CCDC47-204ENST00000582252 FBXO28Q9NVF7 368 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 PARP14Q460N5 1801 aa25.19■■□□□ 1.62
CCDC47-204ENST00000582252 UNCXA6NJT0 531 aa25.18■■□□□ 1.62
CCDC47-204ENST00000582252 RIOK3O14730 519 aaKnown RBP25.18■■□□□ 1.62
CCDC47-204ENST00000582252 KRT18P05783 430 aaKnown RBP25.18■■□□□ 1.62
CCDC47-204ENST00000582252 MTIF2P46199 727 aaKnown RBP25.18■■□□□ 1.62
CCDC47-204ENST00000582252 SAMD1Q6SPF0 538 aaPredicted RBP25.18■■□□□ 1.62
CCDC47-204ENST00000582252 MB21D1Q8N884 522 aa25.18■■□□□ 1.62
CCDC47-204ENST00000582252 RBM46Q8TBY0 533 aaKnown RBP25.18■■□□□ 1.62
CCDC47-204ENST00000582252 TUBGCP2Q9BSJ2 902 aa25.18■■□□□ 1.62
CCDC47-204ENST00000582252 POLR3CQ9BUI4 534 aaPredicted RBP25.18■■□□□ 1.62
CCDC47-204ENST00000582252 AFG3L2Q9Y4W6 797 aa25.18■■□□□ 1.62
CCDC47-204ENST00000582252 SMCHD1A6NHR9 2005 aa25.18■■□□□ 1.62
CCDC47-204ENST00000582252 RBBP6Q7Z6E9 1792 aaKnown RBP25.18■■□□□ 1.62
CCDC47-204ENST00000582252 IGLV3-22A0A075B6J6 115 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 PES1O00541 588 aaKnown RBP25.17■■□□□ 1.62
CCDC47-204ENST00000582252 GYPCP04921 128 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 FDX1P10109 184 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 PRKCSHP14314 528 aaPredicted RBP25.17■■□□□ 1.62
CCDC47-204ENST00000582252 FAM26FQ5R3K3 315 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 MYOCDQ8IZQ8 938 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 C12orf42Q96LP6 360 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 EMILIN3Q9NT22 766 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 VAV3Q9UKW4 847 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 CASP14P31944 242 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 FKBP1BP68106 108 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 CATSPER3Q86XQ3 398 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 ERO1BQ86YB8 467 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 CPLX3Q8WVH0 158 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 SEMA6BQ9H3T3 888 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 MAP3K20Q9NYL2 800 aaKnown RBP25.17■■□□□ 1.62
CCDC47-204ENST00000582252 PPP2R2CQ9Y2T4 447 aa25.17■■□□□ 1.62
CCDC47-204ENST00000582252 CTDP1Q9Y5B0 961 aaPredicted RBP25.17■■□□□ 1.62
CCDC47-204ENST00000582252 VCAM1P19320 739 aa25.16■■□□□ 1.62
CCDC47-204ENST00000582252 PPATQ06203 517 aa25.16■■□□□ 1.62
CCDC47-204ENST00000582252 MOB2Q70IA6 237 aa25.16■■□□□ 1.62
CCDC47-204ENST00000582252 HPS3Q969F9 1004 aa25.16■■□□□ 1.62
CCDC47-204ENST00000582252 IQCDQ96DY2 449 aa25.16■■□□□ 1.62
CCDC47-204ENST00000582252 NUP58Q9BVL2 599 aa25.16■■□□□ 1.62
CCDC47-204ENST00000582252 ZNF408Q9H9D4 720 aa25.16■■□□□ 1.62
CCDC47-204ENST00000582252 CYP11B2P19099 503 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 MUTP22033 750 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 HSD17B4P51659 736 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 SLC12A3P55017 1021 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 CEP55Q53EZ4 464 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 LDLRAD1Q5T700 205 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 CHADLQ6NUI6 762 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 UIMC1Q96RL1 719 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 ELP3Q9H9T3 547 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 TUFT1Q9NNX1 390 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 TMOD4Q9NZQ9 345 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.15■■□□□ 1.62
CCDC47-204ENST00000582252 LOC285556D6RIA3 1793 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 POTEFA5A3E0 1075 aa25.15■■□□□ 1.62
CCDC47-204ENST00000582252 SPDYE5A6NIY4 337 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms