RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 C1orf53Q5VUE5 145 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 IQSEC1Q6DN90 963 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 NLRX1Q86UT6 975 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 DIS3L2Q8IYB7 885 aaKnown RBP15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 RASGRP4Q8TDF6 673 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 CDHR1Q96JP9 859 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 GJB4Q9NTQ9 266 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 CFAP45Q9UL16 551 aa15.31■□□□□ 0.04
CSNK1D-220ENST00000581737 RBM47A0AV96 593 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 M0R2N6 131 aa15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 NKRFO15226 690 aaKnown RBP eCLIP15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 ZNF76P36508 570 aa15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 TNFAIP2Q03169 654 aa15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 CHD9Q3L8U1 2897 aa15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 L1TD1Q5T7N2 865 aaKnown RBP15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 TAPT1Q6NXT6 567 aa15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 LENG1Q96BZ8 264 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 PGBD1Q96JS3 809 aa15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 ZNF396Q96N95 335 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 INPP4AQ96PE3 977 aaPredicted RBP15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 MRVI1Q9Y6F6 885 aa15.3■□□□□ 0.04
CSNK1D-220ENST00000581737 TTC28Q96AY4 2481 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 FIBPO43427 364 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 DUSP11O75319 330 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 PGK1P00558 417 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 CYP3A4P08684 503 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 TGFB3P10600 412 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 USP11P51784 963 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 MRPS9P82933 396 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 GUCY1B3Q02153 619 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 SEPT14Q6ZU15 432 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 NIPA1Q7RTP0 329 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 GPRASP2Q96D09 838 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 RNPC3Q96LT9 517 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 NAP1L4Q99733 375 aaKnown RBP15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 WDR11Q9BZH6 1224 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 FOXP1Q9H334 677 aaPredicted RBP15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 SPC25Q9HBM1 224 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 LMBRD1Q9NUN5 540 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 PHF24Q9UPV7 400 aa15.29■□□□□ 0.04
CSNK1D-220ENST00000581737 MAFGO15525 162 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 PQBP1O60828 265 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 CLTBP09497 229 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 COL9A1P20849 921 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 ICAM3P32942 547 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 SETQ01105 290 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 DUSP28Q4G0W2 176 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 CEP55Q53EZ4 464 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 BRAPQ7Z569 592 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 OXER1Q8TDS5 423 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 TBCKQ8TEA7 893 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 CRYGNQ8WXF5 182 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 UBIAD1Q9Y5Z9 338 aa15.28■□□□□ 0.04
CSNK1D-220ENST00000581737 REV3LO60673 3130 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 ELP1O95163 1332 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 GOLGA6L4A6NEF3 574 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 BTBD18B2RXH4 712 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 KIAA0355O15063 1070 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 ADAMTS3O15072 1205 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 TXNP10599 105 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 GCFC2P16383 781 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 CIITAP33076 1130 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 UBE2HP62256 183 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 NR5A1Q13285 461 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 MTMR1Q13613 665 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 MOXD1Q6UVY6 613 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 PIK3AP1Q6ZUJ8 805 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 NEK8Q86SG6 692 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 GIMAP8Q8ND71 665 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 TNFRSF25Q93038 417 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 MXRA8Q9BRK3 442 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 AP5M1Q9H0R1 490 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 JADE2Q9NQC1 790 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 XPNPEP3Q9NQH7 507 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 PDGFCQ9NRA1 345 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 RTEL1Q9NZ71 1219 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 Q9Y3F1 56 aa15.27■□□□□ 0.04
CSNK1D-220ENST00000581737 A0A1W2PQ45 241 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 A0A1W2PQY0 241 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 SPATA31C2B4DYI2 1134 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 RGS20O76081 388 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 GH1P01241 217 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 SMPD1P17405 629 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 DNAJB2P25686 324 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 PBX2P40425 430 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 FAAP100Q0VG06 881 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 INF2Q27J81 1249 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 TJAP1Q5JTD0 557 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 CCDC62Q6P9F0 684 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 RNF180Q86T96 592 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 TLK2Q86UE8 772 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 NOSTRINQ8IVI9 506 aa15.26■□□□□ 0.03
CSNK1D-220ENST00000581737 SYNRGQ9UMZ2 1314 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 GRXCR1A8MXD5 290 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 MEIS1O00470 390 aa15.25■□□□□ 0.03
CSNK1D-220ENST00000581737 LETM1O95202 739 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms